Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍
https://github.com/madlabunimib/PyCTBN
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608 lines
22 KiB
608 lines
22 KiB
"""Prepares a distribution for installation
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"""
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# The following comment should be removed at some point in the future.
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# mypy: strict-optional=False
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import logging
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import mimetypes
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import os
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import shutil
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from pip._vendor.packaging.utils import canonicalize_name
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from pip._vendor.six import PY2
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from pip._internal.distributions import make_distribution_for_install_requirement
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from pip._internal.distributions.installed import InstalledDistribution
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from pip._internal.exceptions import (
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DirectoryUrlHashUnsupported,
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HashMismatch,
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HashUnpinned,
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InstallationError,
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NetworkConnectionError,
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PreviousBuildDirError,
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VcsHashUnsupported,
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)
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from pip._internal.models.wheel import Wheel
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from pip._internal.network.download import BatchDownloader, Downloader
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from pip._internal.network.lazy_wheel import (
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HTTPRangeRequestUnsupported,
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dist_from_wheel_url,
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)
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from pip._internal.utils.filesystem import copy2_fixed
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from pip._internal.utils.hashes import MissingHashes
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from pip._internal.utils.logging import indent_log
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from pip._internal.utils.misc import display_path, hide_url, path_to_display, rmtree
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from pip._internal.utils.temp_dir import TempDirectory
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from pip._internal.utils.typing import MYPY_CHECK_RUNNING
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from pip._internal.utils.unpacking import unpack_file
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from pip._internal.vcs import vcs
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if MYPY_CHECK_RUNNING:
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from typing import Callable, Dict, Iterable, List, Optional, Tuple
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from mypy_extensions import TypedDict
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from pip._vendor.pkg_resources import Distribution
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from pip._internal.index.package_finder import PackageFinder
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from pip._internal.models.link import Link
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from pip._internal.network.session import PipSession
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from pip._internal.req.req_install import InstallRequirement
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from pip._internal.req.req_tracker import RequirementTracker
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from pip._internal.utils.hashes import Hashes
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if PY2:
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CopytreeKwargs = TypedDict(
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'CopytreeKwargs',
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{
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'ignore': Callable[[str, List[str]], List[str]],
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'symlinks': bool,
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},
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total=False,
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)
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else:
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CopytreeKwargs = TypedDict(
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'CopytreeKwargs',
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{
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'copy_function': Callable[[str, str], None],
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'ignore': Callable[[str, List[str]], List[str]],
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'ignore_dangling_symlinks': bool,
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'symlinks': bool,
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},
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total=False,
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)
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logger = logging.getLogger(__name__)
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def _get_prepared_distribution(
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req, # type: InstallRequirement
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req_tracker, # type: RequirementTracker
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finder, # type: PackageFinder
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build_isolation, # type: bool
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):
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# type: (...) -> Distribution
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"""Prepare a distribution for installation."""
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abstract_dist = make_distribution_for_install_requirement(req)
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with req_tracker.track(req):
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abstract_dist.prepare_distribution_metadata(finder, build_isolation)
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return abstract_dist.get_pkg_resources_distribution()
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def unpack_vcs_link(link, location):
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# type: (Link, str) -> None
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vcs_backend = vcs.get_backend_for_scheme(link.scheme)
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assert vcs_backend is not None
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vcs_backend.unpack(location, url=hide_url(link.url))
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class File(object):
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def __init__(self, path, content_type):
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# type: (str, Optional[str]) -> None
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self.path = path
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if content_type is None:
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self.content_type = mimetypes.guess_type(path)[0]
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else:
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self.content_type = content_type
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def get_http_url(
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link, # type: Link
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download, # type: Downloader
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download_dir=None, # type: Optional[str]
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hashes=None, # type: Optional[Hashes]
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):
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# type: (...) -> File
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temp_dir = TempDirectory(kind="unpack", globally_managed=True)
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# If a download dir is specified, is the file already downloaded there?
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already_downloaded_path = None
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if download_dir:
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already_downloaded_path = _check_download_dir(
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link, download_dir, hashes
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)
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if already_downloaded_path:
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from_path = already_downloaded_path
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content_type = None
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else:
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# let's download to a tmp dir
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from_path, content_type = download(link, temp_dir.path)
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if hashes:
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hashes.check_against_path(from_path)
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return File(from_path, content_type)
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def _copy2_ignoring_special_files(src, dest):
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# type: (str, str) -> None
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"""Copying special files is not supported, but as a convenience to users
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we skip errors copying them. This supports tools that may create e.g.
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socket files in the project source directory.
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"""
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try:
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copy2_fixed(src, dest)
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except shutil.SpecialFileError as e:
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# SpecialFileError may be raised due to either the source or
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# destination. If the destination was the cause then we would actually
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# care, but since the destination directory is deleted prior to
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# copy we ignore all of them assuming it is caused by the source.
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logger.warning(
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"Ignoring special file error '%s' encountered copying %s to %s.",
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str(e),
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path_to_display(src),
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path_to_display(dest),
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)
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def _copy_source_tree(source, target):
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# type: (str, str) -> None
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target_abspath = os.path.abspath(target)
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target_basename = os.path.basename(target_abspath)
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target_dirname = os.path.dirname(target_abspath)
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def ignore(d, names):
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# type: (str, List[str]) -> List[str]
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skipped = [] # type: List[str]
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if d == source:
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# Pulling in those directories can potentially be very slow,
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# exclude the following directories if they appear in the top
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# level dir (and only it).
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# See discussion at https://github.com/pypa/pip/pull/6770
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skipped += ['.tox', '.nox']
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if os.path.abspath(d) == target_dirname:
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# Prevent an infinite recursion if the target is in source.
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# This can happen when TMPDIR is set to ${PWD}/...
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# and we copy PWD to TMPDIR.
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skipped += [target_basename]
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return skipped
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kwargs = dict(ignore=ignore, symlinks=True) # type: CopytreeKwargs
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if not PY2:
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# Python 2 does not support copy_function, so we only ignore
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# errors on special file copy in Python 3.
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kwargs['copy_function'] = _copy2_ignoring_special_files
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shutil.copytree(source, target, **kwargs)
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def get_file_url(
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link, # type: Link
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download_dir=None, # type: Optional[str]
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hashes=None # type: Optional[Hashes]
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):
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# type: (...) -> File
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"""Get file and optionally check its hash.
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"""
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# If a download dir is specified, is the file already there and valid?
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already_downloaded_path = None
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if download_dir:
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already_downloaded_path = _check_download_dir(
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link, download_dir, hashes
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)
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if already_downloaded_path:
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from_path = already_downloaded_path
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else:
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from_path = link.file_path
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# If --require-hashes is off, `hashes` is either empty, the
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# link's embedded hash, or MissingHashes; it is required to
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# match. If --require-hashes is on, we are satisfied by any
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# hash in `hashes` matching: a URL-based or an option-based
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# one; no internet-sourced hash will be in `hashes`.
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if hashes:
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hashes.check_against_path(from_path)
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return File(from_path, None)
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def unpack_url(
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link, # type: Link
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location, # type: str
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download, # type: Downloader
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download_dir=None, # type: Optional[str]
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hashes=None, # type: Optional[Hashes]
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):
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# type: (...) -> Optional[File]
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"""Unpack link into location, downloading if required.
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:param hashes: A Hashes object, one of whose embedded hashes must match,
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or HashMismatch will be raised. If the Hashes is empty, no matches are
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required, and unhashable types of requirements (like VCS ones, which
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would ordinarily raise HashUnsupported) are allowed.
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"""
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# non-editable vcs urls
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if link.is_vcs:
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unpack_vcs_link(link, location)
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return None
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# If it's a url to a local directory
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if link.is_existing_dir():
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if os.path.isdir(location):
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rmtree(location)
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_copy_source_tree(link.file_path, location)
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return None
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# file urls
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if link.is_file:
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file = get_file_url(link, download_dir, hashes=hashes)
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# http urls
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else:
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file = get_http_url(
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link,
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download,
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download_dir,
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hashes=hashes,
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)
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# unpack the archive to the build dir location. even when only downloading
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# archives, they have to be unpacked to parse dependencies, except wheels
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if not link.is_wheel:
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unpack_file(file.path, location, file.content_type)
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return file
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def _check_download_dir(link, download_dir, hashes):
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# type: (Link, str, Optional[Hashes]) -> Optional[str]
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""" Check download_dir for previously downloaded file with correct hash
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If a correct file is found return its path else None
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"""
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download_path = os.path.join(download_dir, link.filename)
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if not os.path.exists(download_path):
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return None
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# If already downloaded, does its hash match?
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logger.info('File was already downloaded %s', download_path)
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if hashes:
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try:
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hashes.check_against_path(download_path)
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except HashMismatch:
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logger.warning(
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'Previously-downloaded file %s has bad hash. '
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'Re-downloading.',
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download_path
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)
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os.unlink(download_path)
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return None
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return download_path
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class RequirementPreparer(object):
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"""Prepares a Requirement
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"""
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def __init__(
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self,
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build_dir, # type: str
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download_dir, # type: Optional[str]
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src_dir, # type: str
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build_isolation, # type: bool
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req_tracker, # type: RequirementTracker
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session, # type: PipSession
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progress_bar, # type: str
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finder, # type: PackageFinder
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require_hashes, # type: bool
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use_user_site, # type: bool
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lazy_wheel, # type: bool
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):
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# type: (...) -> None
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super(RequirementPreparer, self).__init__()
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self.src_dir = src_dir
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self.build_dir = build_dir
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self.req_tracker = req_tracker
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self._session = session
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self._download = Downloader(session, progress_bar)
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self._batch_download = BatchDownloader(session, progress_bar)
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self.finder = finder
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# Where still-packed archives should be written to. If None, they are
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# not saved, and are deleted immediately after unpacking.
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self.download_dir = download_dir
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# Is build isolation allowed?
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self.build_isolation = build_isolation
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# Should hash-checking be required?
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self.require_hashes = require_hashes
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# Should install in user site-packages?
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self.use_user_site = use_user_site
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# Should wheels be downloaded lazily?
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self.use_lazy_wheel = lazy_wheel
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# Memoized downloaded files, as mapping of url: (path, mime type)
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self._downloaded = {} # type: Dict[str, Tuple[str, str]]
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# Previous "header" printed for a link-based InstallRequirement
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self._previous_requirement_header = ("", "")
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def _log_preparing_link(self, req):
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# type: (InstallRequirement) -> None
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"""Provide context for the requirement being prepared."""
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if req.link.is_file and not req.original_link_is_in_wheel_cache:
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message = "Processing %s"
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information = str(display_path(req.link.file_path))
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else:
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message = "Collecting %s"
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information = str(req.req or req)
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if (message, information) != self._previous_requirement_header:
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self._previous_requirement_header = (message, information)
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logger.info(message, information)
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if req.original_link_is_in_wheel_cache:
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with indent_log():
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logger.info("Using cached %s", req.link.filename)
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def _ensure_link_req_src_dir(self, req, parallel_builds):
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# type: (InstallRequirement, bool) -> None
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"""Ensure source_dir of a linked InstallRequirement."""
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# Since source_dir is only set for editable requirements.
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if req.link.is_wheel:
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# We don't need to unpack wheels, so no need for a source
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# directory.
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return
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assert req.source_dir is None
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# We always delete unpacked sdists after pip runs.
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req.ensure_has_source_dir(
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self.build_dir,
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autodelete=True,
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parallel_builds=parallel_builds,
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)
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# If a checkout exists, it's unwise to keep going. version
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# inconsistencies are logged later, but do not fail the
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# installation.
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# FIXME: this won't upgrade when there's an existing
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# package unpacked in `req.source_dir`
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if os.path.exists(os.path.join(req.source_dir, 'setup.py')):
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raise PreviousBuildDirError(
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"pip can't proceed with requirements '{}' due to a"
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"pre-existing build directory ({}). This is likely "
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"due to a previous installation that failed . pip is "
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"being responsible and not assuming it can delete this. "
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"Please delete it and try again.".format(req, req.source_dir)
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)
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def _get_linked_req_hashes(self, req):
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# type: (InstallRequirement) -> Hashes
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# By the time this is called, the requirement's link should have
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# been checked so we can tell what kind of requirements req is
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# and raise some more informative errors than otherwise.
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# (For example, we can raise VcsHashUnsupported for a VCS URL
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# rather than HashMissing.)
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if not self.require_hashes:
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return req.hashes(trust_internet=True)
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# We could check these first 2 conditions inside unpack_url
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# and save repetition of conditions, but then we would
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# report less-useful error messages for unhashable
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# requirements, complaining that there's no hash provided.
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if req.link.is_vcs:
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raise VcsHashUnsupported()
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if req.link.is_existing_dir():
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raise DirectoryUrlHashUnsupported()
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# Unpinned packages are asking for trouble when a new version
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# is uploaded. This isn't a security check, but it saves users
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# a surprising hash mismatch in the future.
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# file:/// URLs aren't pinnable, so don't complain about them
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# not being pinned.
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if req.original_link is None and not req.is_pinned:
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raise HashUnpinned()
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# If known-good hashes are missing for this requirement,
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# shim it with a facade object that will provoke hash
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# computation and then raise a HashMissing exception
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# showing the user what the hash should be.
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return req.hashes(trust_internet=False) or MissingHashes()
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def _fetch_metadata_using_lazy_wheel(self, link):
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# type: (Link) -> Optional[Distribution]
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"""Fetch metadata using lazy wheel, if possible."""
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if not self.use_lazy_wheel:
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return None
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if self.require_hashes:
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logger.debug('Lazy wheel is not used as hash checking is required')
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return None
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if link.is_file or not link.is_wheel:
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logger.debug(
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'Lazy wheel is not used as '
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'%r does not points to a remote wheel',
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link,
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)
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return None
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wheel = Wheel(link.filename)
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name = canonicalize_name(wheel.name)
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logger.info(
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'Obtaining dependency information from %s %s',
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name, wheel.version,
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)
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url = link.url.split('#', 1)[0]
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try:
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return dist_from_wheel_url(name, url, self._session)
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except HTTPRangeRequestUnsupported:
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logger.debug('%s does not support range requests', url)
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return None
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def prepare_linked_requirement(self, req, parallel_builds=False):
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# type: (InstallRequirement, bool) -> Distribution
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"""Prepare a requirement to be obtained from req.link."""
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assert req.link
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link = req.link
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self._log_preparing_link(req)
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with indent_log():
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# Check if the relevant file is already available
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# in the download directory
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file_path = None
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if self.download_dir is not None and link.is_wheel:
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hashes = self._get_linked_req_hashes(req)
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file_path = _check_download_dir(req.link, self.download_dir, hashes)
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if file_path is not None:
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# The file is already available, so mark it as downloaded
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self._downloaded[req.link.url] = file_path, None
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else:
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# The file is not available, attempt to fetch only metadata
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wheel_dist = self._fetch_metadata_using_lazy_wheel(link)
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if wheel_dist is not None:
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req.needs_more_preparation = True
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return wheel_dist
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# None of the optimizations worked, fully prepare the requirement
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return self._prepare_linked_requirement(req, parallel_builds)
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def prepare_linked_requirements_more(self, reqs, parallel_builds=False):
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# type: (Iterable[InstallRequirement], bool) -> None
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"""Prepare a linked requirement more, if needed."""
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reqs = [req for req in reqs if req.needs_more_preparation]
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links = [req.link for req in reqs]
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# Let's download to a temporary directory.
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tmpdir = TempDirectory(kind="unpack", globally_managed=True).path
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self._downloaded.update(self._batch_download(links, tmpdir))
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for req in reqs:
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self._prepare_linked_requirement(req, parallel_builds)
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def _prepare_linked_requirement(self, req, parallel_builds):
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# type: (InstallRequirement, bool) -> Distribution
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assert req.link
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link = req.link
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self._ensure_link_req_src_dir(req, parallel_builds)
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hashes = self._get_linked_req_hashes(req)
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if link.url not in self._downloaded:
|
|
try:
|
|
local_file = unpack_url(
|
|
link, req.source_dir, self._download,
|
|
self.download_dir, hashes,
|
|
)
|
|
except NetworkConnectionError as exc:
|
|
raise InstallationError(
|
|
'Could not install requirement {} because of HTTP '
|
|
'error {} for URL {}'.format(req, exc, link)
|
|
)
|
|
else:
|
|
file_path, content_type = self._downloaded[link.url]
|
|
if hashes:
|
|
hashes.check_against_path(file_path)
|
|
local_file = File(file_path, content_type)
|
|
|
|
# For use in later processing,
|
|
# preserve the file path on the requirement.
|
|
if local_file:
|
|
req.local_file_path = local_file.path
|
|
|
|
dist = _get_prepared_distribution(
|
|
req, self.req_tracker, self.finder, self.build_isolation,
|
|
)
|
|
return dist
|
|
|
|
def save_linked_requirement(self, req):
|
|
# type: (InstallRequirement) -> None
|
|
assert self.download_dir is not None
|
|
assert req.link is not None
|
|
link = req.link
|
|
if link.is_vcs or (link.is_existing_dir() and req.editable):
|
|
# Make a .zip of the source_dir we already created.
|
|
req.archive(self.download_dir)
|
|
return
|
|
|
|
if link.is_existing_dir():
|
|
logger.debug(
|
|
'Not copying link to destination directory '
|
|
'since it is a directory: %s', link,
|
|
)
|
|
return
|
|
if req.local_file_path is None:
|
|
# No distribution was downloaded for this requirement.
|
|
return
|
|
|
|
download_location = os.path.join(self.download_dir, link.filename)
|
|
if not os.path.exists(download_location):
|
|
shutil.copy(req.local_file_path, download_location)
|
|
download_path = display_path(download_location)
|
|
logger.info('Saved %s', download_path)
|
|
|
|
def prepare_editable_requirement(
|
|
self,
|
|
req, # type: InstallRequirement
|
|
):
|
|
# type: (...) -> Distribution
|
|
"""Prepare an editable requirement
|
|
"""
|
|
assert req.editable, "cannot prepare a non-editable req as editable"
|
|
|
|
logger.info('Obtaining %s', req)
|
|
|
|
with indent_log():
|
|
if self.require_hashes:
|
|
raise InstallationError(
|
|
'The editable requirement {} cannot be installed when '
|
|
'requiring hashes, because there is no single file to '
|
|
'hash.'.format(req)
|
|
)
|
|
req.ensure_has_source_dir(self.src_dir)
|
|
req.update_editable(self.download_dir is None)
|
|
|
|
dist = _get_prepared_distribution(
|
|
req, self.req_tracker, self.finder, self.build_isolation,
|
|
)
|
|
|
|
req.check_if_exists(self.use_user_site)
|
|
|
|
return dist
|
|
|
|
def prepare_installed_requirement(
|
|
self,
|
|
req, # type: InstallRequirement
|
|
skip_reason # type: str
|
|
):
|
|
# type: (...) -> Distribution
|
|
"""Prepare an already-installed requirement
|
|
"""
|
|
assert req.satisfied_by, "req should have been satisfied but isn't"
|
|
assert skip_reason is not None, (
|
|
"did not get skip reason skipped but req.satisfied_by "
|
|
"is set to {}".format(req.satisfied_by)
|
|
)
|
|
logger.info(
|
|
'Requirement %s: %s (%s)',
|
|
skip_reason, req, req.satisfied_by.version
|
|
)
|
|
with indent_log():
|
|
if self.require_hashes:
|
|
logger.debug(
|
|
'Since it is already installed, we are trusting this '
|
|
'package without checking its hash. To ensure a '
|
|
'completely repeatable environment, install into an '
|
|
'empty virtualenv.'
|
|
)
|
|
return InstalledDistribution(req).get_pkg_resources_distribution()
|
|
|