1
0
Fork 0
Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍 https://github.com/madlabunimib/PyCTBN
You can not select more than 25 topics Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
This repo is archived. You can view files and clone it, but cannot push or open issues/pull-requests.
PyCTBN/docs/_build/html/searchindex.js

1 lines
18 KiB

Search.setIndex({docnames:["PyCTBN","PyCTBN.estimators","PyCTBN.optimizers","PyCTBN.structure_graph","PyCTBN.utility","examples","index","modules"],envversion:{"sphinx.domains.c":2,"sphinx.domains.changeset":1,"sphinx.domains.citation":1,"sphinx.domains.cpp":3,"sphinx.domains.index":1,"sphinx.domains.javascript":2,"sphinx.domains.math":2,"sphinx.domains.python":2,"sphinx.domains.rst":2,"sphinx.domains.std":1,sphinx:56},filenames:["PyCTBN.rst","PyCTBN.estimators.rst","PyCTBN.optimizers.rst","PyCTBN.structure_graph.rst","PyCTBN.utility.rst","examples.rst","index.rst","modules.rst"],objects:{"":{PyCTBN:[0,0,0,"-"]},"PyCTBN.estimators":{fam_score_calculator:[1,0,0,"-"],parameters_estimator:[1,0,0,"-"],structure_constraint_based_estimator:[1,0,0,"-"],structure_estimator:[1,0,0,"-"],structure_score_based_estimator:[1,0,0,"-"]},"PyCTBN.estimators.fam_score_calculator":{FamScoreCalculator:[1,1,1,""]},"PyCTBN.estimators.fam_score_calculator.FamScoreCalculator":{get_fam_score:[1,2,1,""],marginal_likelihood_q:[1,2,1,""],marginal_likelihood_theta:[1,2,1,""],single_cim_xu_marginal_likelihood_q:[1,2,1,""],single_cim_xu_marginal_likelihood_theta:[1,2,1,""],single_internal_cim_xxu_marginal_likelihood_theta:[1,2,1,""],variable_cim_xu_marginal_likelihood_q:[1,2,1,""],variable_cim_xu_marginal_likelihood_theta:[1,2,1,""]},"PyCTBN.estimators.parameters_estimator":{ParametersEstimator:[1,1,1,""]},"PyCTBN.estimators.parameters_estimator.ParametersEstimator":{compute_parameters:[1,2,1,""],compute_parameters_for_node:[1,2,1,""],compute_state_res_time_for_node:[1,2,1,""],compute_state_transitions_for_a_node:[1,2,1,""],fast_init:[1,2,1,""],init_sets_cims_container:[1,2,1,""]},"PyCTBN.estimators.structure_constraint_based_estimator":{StructureConstraintBasedEstimator:[1,1,1,""]},"PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator":{complete_test:[1,2,1,""],compute_thumb_value:[1,2,1,""],ctpc_algorithm:[1,2,1,""],estimate_structure:[1,2,1,""],independence_test:[1,2,1,""],one_iteration_of_CTPC_algorithm:[1,2,1,""]},"PyCTBN.estimators.structure_estimator":{StructureEstimator:[1,1,1,""]},"PyCTBN.estimators.structure_estimator.StructureEstimator":{adjacency_matrix:[1,2,1,""],build_complete_graph:[1,2,1,""],build_removable_edges_matrix:[1,2,1,""],estimate_structure:[1,2,1,""],generate_possible_sub_sets_of_size:[1,2,1,""],remove_diagonal_elements:[1,2,1,""],save_plot_estimated_structure_graph:[1,2,1,""],save_results:[1,2,1,""],spurious_edges:[1,2,1,""]},"PyCTBN.estimators.structure_score_based_estimator":{StructureScoreBasedEstimator:[1,1,1,""]},"PyCTBN.estimators.structure_score_based_estimator.StructureScoreBasedEstimator":{estimate_parents:[1,2,1,""],estimate_structure:[1,2,1,""],get_score_from_graph:[1,2,1,""]},"PyCTBN.optimizers":{constraint_based_optimizer:[2,0,0,"-"],hill_climbing_search:[2,0,0,"-"],optimizer:[2,0,0,"-"],tabu_search:[2,0,0,"-"]},"PyCTBN.optimizers.constraint_based_optimizer":{ConstraintBasedOptimizer:[2,1,1,""]},"PyCTBN.optimizers.constraint_based_optimizer.ConstraintBasedOptimizer":{optimize_structure:[2,2,1,""]},"PyCTBN.optimizers.hill_climbing_search":{HillClimbing:[2,1,1,""]},"PyCTBN.optimizers.hill_climbing_search.HillClimbing":{optimize_structure:[2,2,1,""]},"PyCTBN.optimizers.optimizer":{Optimizer:[2,1,1,""]},"PyCTBN.optimizers.optimizer.Optimizer":{optimize_structure:[2,2,1,""]},"PyCTBN.optimizers.tabu_search":{TabuSearch:[2,1,1,""]},"PyCTBN.optimizers.tabu_search.TabuSearch":{optimize_structure:[2,2,1,""]},"PyCTBN.structure_graph":{abstract_sample_path:[3,0,0,"-"],conditional_intensity_matrix:[3,0,0,"-"],network_graph:[3,0,0,"-"],sample_path:[3,0,0,"-"],set_of_cims:[3,0,0,"-"],sets_of_cims_container:[3,0,0,"-"],structure:[3,0,0,"-"],trajectory:[3,0,0,"-"]},"PyCTBN.structure_graph.abstract_sample_path":{AbstractSamplePath:[3,1,1,""]},"PyCTBN.structure_graph.abstract_sample_path.AbstractSamplePath":{build_structure:[3,2,1,""],build_trajectories:[3,2,1,""]},"PyCTBN.structure_graph.conditional_intensity_matrix":{ConditionalIntensityMatrix:[3,1,1,""]},"PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix":{cim:[3,2,1,""],compute_cim_coefficients:[3,2,1,""],state_residence_times:[3,2,1,""],state_transition_matrix:[3,2,1,""]},"PyCTBN.structure_graph.network_graph":{NetworkGraph:[3,1,1,""]},"PyCTBN.structure_graph.network_graph.NetworkGraph":{add_edges:[3,2,1,""],add_nodes:[3,2,1,""],build_p_comb_structure_for_a_node:[3,2,1,""],build_time_columns_filtering_for_a_node:[3,2,1,""],build_time_scalar_indexing_structure_for_a_node:[3,2,1,""],build_transition_filtering_for_a_node:[3,2,1,""],build_transition_scalar_indexing_structure_for_a_node:[3,2,1,""],clear_indexing_filtering_structures:[3,2,1,""],edges:[3,2,1,""],fast_init:[3,2,1,""],get_node_indx:[3,2,1,""],get_ordered_by_indx_set_of_parents:[3,2,1,""],get_parents_by_id:[3,2,1,""],get_positional_node_indx:[3,2,1,""],get_states_number:[3,2,1,""],has_edge:[3,2,1,""],init_graph:[3,2,1,""],nodes:[3,2,1,""],nodes_indexes:[3,2,1,""],nodes_values:[3,2,1,""],p_combs:[3,2,1,""],remove_edges:[3,2,1,""],remove_node:[3,2,1,""],time_filtering:[3,2,1,""],time_scalar_indexing_strucure:[3,2,1,""],transition_filtering:[3,2,1,""],transition_scalar_indexing_structure:[3,2,1,""]},"PyCTBN.structure_graph.sample_path":{SamplePath:[3,1,1,""]},"PyCTBN.structure_graph.sample_path.SamplePath":{build_structure:[3,2,1,""],build_trajectories:[3,2,1,""],clear_memory:[3,2,1,""],has_prior_net_structure:[3,2,1,""],structure:[3,2,1,""],total_variables_count:[3,2,1,""],trajectories:[3,2,1,""]},"PyCTBN.structure_graph.set_of_cims":{SetOfCims:[3,1,1,""]},"PyCTBN.structure_graph.set_of_cims.SetOfCims":{actual_cims:[3,2,1,""],build_cims:[3,2,1,""],build_times_and_transitions_structures:[3,2,1,""],filter_cims_with_mask:[3,2,1,""],get_cims_number:[3,2,1,""],p_combs:[3,2,1,""]},"PyCTBN.structure_graph.sets_of_cims_container":{SetsOfCimsContainer:[3,1,1,""]},"PyCTBN.structure_graph.sets_of_cims_container.SetsOfCimsContainer":{get_cims_of_node:[3,2,1,""],get_set_of_cims:[3,2,1,""],init_cims_structure:[3,2,1,""]},"PyCTBN.structure_graph.structure":{Structure:[3,1,1,""]},"PyCTBN.structure_graph.structure.Structure":{add_edge:[3,2,1,""],clean_structure_edges:[3,2,1,""],contains_edge:[3,2,1,""],edges:[3,2,1,""],get_node_id:[3,2,1,""],get_node_indx:[3,2,1,""],get_positional_node_indx:[3,2,1,""],get_states_number:[3,2,1,""],nodes_indexes:[3,2,1,""],nodes_labels:[3,2,1,""],nodes_values:[3,2,1,""],remove_edge:[3,2,1,""],remove_node:[3,2,1,""],total_variables_number:[3,2,1,""]},"PyCTBN.structure_graph.trajectory":{Trajectory:[3,1,1,""]},"PyCTBN.structure_graph.trajectory.Trajectory":{complete_trajectory:[3,2,1,""],size:[3,2,1,""],times:[3,2,1,""],trajectory:[3,2,1,""]},"PyCTBN.utility":{abstract_importer:[4,0,0,"-"],cache:[4,0,0,"-"],decorators:[4,0,0,"-"],json_importer:[4,0,0,"-"],sample_importer:[4,0,0,"-"]},"PyCTBN.utility.abstract_importer":{AbstractImporter:[4,1,1,""]},"PyCTBN.utility.abstract_importer.AbstractImporter":{build_list_of_samples_array:[4,2,1,""],build_sorter:[4,2,1,""],clear_concatenated_frame:[4,2,1,""],compute_row_delta_in_all_samples_frames:[4,2,1,""],compute_row_delta_sigle_samples_frame:[4,2,1,""],concatenated_samples:[4,2,1,""],dataset_id:[4,2,1,""],file_path:[4,2,1,""],sorter:[4,2,1,""],structure:[4,2,1,""],variables:[4,2,1,""]},"PyCTBN.utility.cache":{Cache:[4,1,1,""]},"PyCTBN.utility.cache.Cache":{clear:[4,2,1,""],find:[4,2,1,""],put:[4,2,1,""]},"PyCTBN.utility.decorators":{timing:[4,3,1,""],timing_write:[4,3,1,""]},"PyCTBN.utility.json_importer":{JsonImporter:[4,1,1,""]},"PyCTBN.utility.json_importer.JsonImporter":{build_sorter:[4,2,1,""],clear_data_frame_list:[4,2,1,""],dataset_id:[4,2,1,""],import_data:[4,2,1,""],import_sampled_cims:[4,2,1,""],import_structure:[4,2,1,""],import_trajectories:[4,2,1,""],import_variables:[4,2,1,""],normalize_trajectories:[4,2,1,""],one_level_normalizing:[4,2,1,""],read_json_file:[4,2,1,""]},"PyCTBN.utility.sample_importer":{SampleImporter:[4,1,1,""]},"PyCTBN.utility.sample_importer.SampleImporter":{build_sorter:[4,2,1,""],dataset_id:[4,2,1,""],import_data:[4,2,1,""]},PyCTBN:{estimators:[1,0,0,"-"],optimizers:[2,0,0,"-"],structure_graph:[3,0,0,"-"],utility:[4,0,0,"-"]}},objnames:{"0":["py","module","Python module"],"1":["py","class","Python class"],"2":["py","method","Python method"],"3":["py","function","Python function"]},objtypes:{"0":"py:module","1":"py:class","2":"py:method","3":"py:function"},terms:{"abstract":[1,2,3,4,5],"boolean":[1,3],"class":5,"default":[1,2],"float":1,"function":1,"import":[3,4,6],"int":[1,2,3,4],"null":1,"return":[1,2,3,4,5],"static":[1,3],"super":5,"true":[1,5],"var":5,"void":3,HAS:4,Has:[1,3],NOT:1,The:[1,3,4,5],Use:[1,5],__init__:5,_actual_cach:4,_actual_cim:3,_actual_trajectori:3,_aggregated_info_about_nodes_par:3,_array_indx:4,_cach:1,_cim:3,_complete_graph:1,_df_samples_list:[4,5],_df_structur:4,_df_variabl:[4,5],_file_path:5,_graph:[3,5],_import:3,_list_of_sets_of_par:4,_net_graph:1,_node:1,_node_id:3,_nodes_indx:1,_nodes_v:1,_p_combs_structur:3,_raw_data:4,_sample_path:1,_single_set_of_cim:1,_sorter:[4,5],_state_residence_tim:3,_structur:3,_structure_label:4,_time:3,_time_filt:3,_time_scalar_indexing_structur:3,_total_variables_count:3,_total_variables_numb:3,_trajectori:3,_transition_filt:3,_transition_matric:3,_transition_scalar_indexing_structur:3,_variables_label:4,abc:[2,3,4],about:[2,3],abstract_import:[0,3,7],abstract_sample_path:[0,7],abstractimport:[3,4,5],abstractsamplepath:3,act:4,actual:[1,3],actual_cim:[3,5],add:[3,4],add_edg:3,add_nod:3,added:1,addit:1,adjac:[1,5],adjacency_matrix:[1,5],after:4,against:1,aggreg:3,aggrega:3,algorithm:[1,2,5],all:[1,2,3,4,5],alpha_xu:1,alpha_xxu:1,alreadi:[4,5],also:[1,3],ani:[1,2],anoth:3,append:[1,3],approach:1,arc:4,arrai:[1,3,4,5],assign:[1,3],assum:1,attribuit:3,attribut:3,axi:5,base:[1,2,3,4],bayesian:1,befor:[1,2],belong:1,best:1,between:4,bool:[1,3],both:[1,4],bound:3,build:[1,3,4,5],build_cim:3,build_complete_graph:1,build_list_of_samples_arrai:4,build_p_comb_structure_for_a_nod:3,build_removable_edges_matrix:1,build_sort:[4,5],build_structur:[3,5],build_time_columns_filtering_for_a_nod:3,build_time_scalar_indexing_structure_for_a_nod:3,build_times_and_transitions_structur:3,build_trajectori:[3,5],build_transition_filtering_for_a_nod:3,build_transition_scalar_indexing_structure_for_a_nod:3,built:1,cach:[0,1,7],calcul:1,call:[4,5],cardin:[1,3,4],cardinalit:[3,4],caridin:3,caridinalit:3,chang:[3,4],check:3,chi:1,chi_test:1,chi_test_alfa:1,child:[1,2],child_indx:1,child_states_numb:1,child_val:1,cim1:1,cim2:1,cim:[1,3,4,5],cim_indx:3,cims_kei:4,clean_structure_edg:3,clear:[3,4],clear_concatenated_fram:4,clear_data_frame_list:4,clear_indexing_filtering_structur:3,clear_memori:3,climb:[1,2],coeffici:3,col:3,color:1,cols_filt:1,column:[1,3,4,5],columns_head:4,comb:3,combin:[3,4],combinatori:3,common:1,complet:[1,3,4],complete_test:1,complete_trajectori:3,comput:[1,2,3,4,5],compute_cim_coeffici:3,compute_paramet:1,compute_parameters_for_nod:[1,5],compute_row_delta_in_all_samples_fram:[4,5],compute_row_delta_sigle_samples_fram:4,compute_state_res_time_for_nod:1,compute_state_transitions_for_a_nod:1,compute_thumb_valu:1,concatanated_sampl:4,concaten:[3,4],concatenated_sampl:4,condit:3,conditional_intensity_matrix:[0,1,7],conditionalintensitymatrix:[1,3],consid:3,constraint:1,constraint_based_optim:[0,7],constraintbasedoptim:2,construct:[3,4,5],conta:4,contain:[1,3,4],contains_edg:3,content:[6,7],convert:[1,4],copi:4,core:4,correct:[3,4],could:1,count:3,creat:[1,3,5],csv:5,csvimport:5,ctbn:1,ctpc:[1,2,5],ctpc_algorithm:[1,5],current:[1,2,4],cut:4,dafram:4,data:[1,2,3,4,6],datafram:[3,4,5],dataset:[1,2,3,4],dataset_id:[4,5],datfram:4,decor:[0,7],def:5,defin:4,definit:4,defualt:1,delta:[1,3,4],demonstr:5,describ:4,desir:[1,3],df_samples_list:4,dict:[4,5],dictionari:4,differ:4,digraph:1,dimens:3,dir:5,direct:[1,3],directli:4,disabl:[1,2],disable_multiprocess:1,distribuit:1,doc:4,doubl:3,download:5,drop:5,duplic:3,dyn:5,each:[1,2,4],edg:[1,3,4,5],edges_list:3,end:4,entir:1,enumer:3,equal:3,est:5,estim:[0,2,3,6,7],estimate_par:1,estimate_structur:1,everi:[3,4],exam:5,exampl:[4,6],exclud:1,exctract:4,exist:4,exp_test_alfa:1,exponenti:1,expos:4,extend:5,extens:4,extract:[3,4],fals:1,fam_score_calcul:[0,7],famscor:1,famscorecalcul:1,fast_init:[1,3,5],file:[1,4,5],file_path:[4,5],filepath:4,fill:[1,5],filter:[1,3],filter_cims_with_mask:3,find:[1,4],first:[1,5],follow:[3,4],form:3,format:5,formula:1,found:4,frame:4,from:[1,3,4,5],from_nod:4,gener:1,generate_possible_sub_sets_of_s:1,get:[1,4],get_cims_numb:3,get_cims_of_nod:3,get_fam_scor:1,get_node_id:3,get_node_indx:3,get_ordered_by_indx_set_of_par:3,get_parents_by_id:3,get_positional_node_indx:3,get_score_from_graph:1,get_set_of_cim:3,get_states_numb:3,given:[1,3,4],glob:5,graph:[1,3,5],graph_struct:3,graphic:1,grid:3,grpah:5,has:[4,5],has_edg:3,has_prior_net_structur:3,have:4,header:4,header_column:4,hill:[1,2],hill_climbing_search:[0,7],hillclimb:2,hold:[1,3],how:4,hyperparamet:1,hypothesi:1,identifi:[1,3,4],iff:1,implement:[2,4,6],import_data:[4,5],import_sampled_cim:4,import_structur:4,import_trajectori:4,import_vari:[4,5],improv:[1,2],independ:1,independence_test:1,index:[1,3,4,5,6],indic:3,indx:[3,4],info:[3,5],inform:[2,3],init:5,init_cims_structur:3,init_graph:3,init_sets_cims_contain:1,initi:[1,3,4,5],inplac:5,input:1,insid:5,insiem:3,instal:6,instanc:3,interest:3,interfac:2,intes:3,iter:[1,2],iterations_numb:[1,2],its:[1,2],join:5,json:[1,4,5],json_import:[0,7],jsonarrai:4,jsonimport:[4,5],keep:[1,2,4],kei:[3,4],knowledg:1,known:1,known_edg:1,label:[1,2,3,4],lenght:[1,2],level:[1,4],likelihood:1,list:[1,2,3,4,5],list_of_column:3,list_of_edg:3,list_of_kei:3,list_of_nod:3,list_of_parents_states_numb:3,load:[1,4],loop:1,m_xu_suff_stat:1,m_xxu_suff_stat:1,main:5,margin:1,marginal_likelihood_q:1,marginal_likelihood_theta:1,mask:3,mask_arr:3,matric:[1,3],matrix:[1,3,4,5],max_par:[1,2],maximum:[1,2],member:[3,4],mention:3,merg:4,method:[1,4],model:1,modul:[6,7],multipl:4,multiprocess:1,name:[1,3,4,5],ndarrai:[1,3,4],necessari:[1,3,4],nest:4,net:[1,2,3,4,5],net_graph:1,network:[1,3,4],network_graph:[0,1,7],networkgraph:[1,3,5],networkx:1,node:[1,2,3,4,5],node_id:[1,2,3],node_index:3,node_indx:[1,3],node_st:3,node_states_numb:3,nodes_index:3,nodes_indexes_arr:3,nodes_label:3,nodes_labels_list:3,nodes_numb:3,nodes_vals_arr:3,nodes_valu:[3,5],none:[1,2,3,4,5],normal:4,normalize_trajectori:4,number:[1,2,3],numpi:[1,3,4],obj:5,object:[1,2,3,4,5],oggetti:3,one:[3,4],one_iteration_of_ctpc_algorithm:1,one_level_norm:4,onli:4,oper:1,optim:[0,1,7],optimize_structur:2,option:[1,2],order:[1,4],origin:4,original_cols_numb:3,otherwis:[1,4],out:4,outer:[4,5],over:1,own:6,p_comb:3,p_combs_list:3,p_indx:3,packag:7,page:6,panda:[4,5],param:3,paramet:[1,2,3,4,6],parameters_estim:[0,7],parametersestim:[1,5],parent:[1,2,3,4],parent_indx:1,parent_label:1,parent_set:1,parent_set_v:1,parent_v:1,parents_cardin:3,parents_comb:4,parents_index:3,parents_label:3,parents_states_numb:3,parents_v:3,parents_valu:3,part:1,particular:[1,4],pass:5,path:[1,4,5],patienc:[1,2],peest:5,perform:1,pip:5,place:4,plot:1,posit:[3,4],possibl:[1,3],predict:2,prepar:4,present:[1,4],print:5,prior:[1,5],prior_net_structur:4,process:[1,2,3,4],properli:4,properti:[3,4],put:4,pyctbn:5,q_xx:3,rappres:3,raw:4,raw_data:4,read:[4,5],read_csv:5,read_csv_fil:5,read_fil:5,read_json_fil:4,real:[1,3,4,5],red:1,refer:[3,4],reject:1,rel:3,relat:4,releas:5,remain:4,remov:[1,3,4],remove_diagonal_el:1,remove_edg:3,remove_nod:3,repres:3,represent:1,res:3,resid:[1,3],result:[1,4,5],results_:1,rtype:3,rule:[1,2],same:4,sampl:[3,4,5],sample_fram:[4,5],sample_import:[0,7],sample_path:[0,1,7],sampleimport:4,samplepath:[1,3,5],samples_label:4,save:[1,5],save_plot_estimated_structure_graph:1,save_result:[1,5],scalar_index:1,scalar_indexes_struct:1,score:1,se1:5,search:[1,2,6],second:1,see:4,select:5,self:[1,3,4,5],sep:1,sep_set:1,set:[1,3,4],set_of_cim:[0,1,4,7],setofcim:[1,3,4,5],sets_of_cim:3,sets_of_cims_contain:[0,7],setsofcimscontain:3,shift:[3,4],shifted_cols_head:4,show:1,signific:1,simbol:4,simpl:5,simpli:5,sinc:3,single_cim_xu_marginal_likelihood_q:1,single_cim_xu_marginal_likelihood_theta:1,single_internal_cim_xxu_marginal_likelihood_theta:1,size:[1,3],socim:[3,4],sofc1:5,sorter:4,specif:[1,3,5],spuriou:1,spurious_edg:1,start:4,state:[1,3],state_res_tim:3,state_residence_tim:3,state_transition_matrix:3,states_number_per_nod:3,statist:1,stop:[1,2],str:[1,2,3,4,5],string:[1,2,3,4],structur:[0,1,2,4,6,7],structure_constraint_based_estim:[0,7],structure_estim:[0,2,7],structure_estimation_exampl:5,structure_graph:[0,1,4,7],structure_label:4,structure_score_based_estim:[0,7],structureconstraintbasedestim:1,structureestim:[1,2,5],structurescorebasedestim:1,structut:3,style:1,submodul:[0,7],subpackag:7,subset:1,suffici:1,suffuci:1,symbol:[3,4],synthet:4,t_xu_suff_stat:1,tabu:[1,2],tabu_length:[1,2],tabu_rules_dur:[1,2],tabu_search:[0,7],tabusearch:2,take:5,tar:5,task:[1,3],tau_xu:1,ternari:5,test:1,test_child:1,test_par:1,tha:4,theta:1,thi:[1,3,4,5],three:5,thumb:1,thumb_threshold:1,thumb_valu:1,time:[1,3,4,5],time_filt:3,time_kei:4,time_scalar_indexing_strucur:3,timestamp:4,timing_writ:4,to_nod:4,tot_vars_count:[1,2],total:[1,3],total_variables_count:3,total_variables_numb:3,traj:4,trajecory_head:4,trajectori:[0,1,4,5,7],trajectories_kei:4,trajectorii:3,trajectory_list:4,trajectri:5,transit:[1,3,4],transition_filt:3,transition_matric:3,transition_scalar_indexing_structur:3,tri:4,tupl:3,tutori:4,two:1,type:[1,2,3,4,5],union:4,uniqu:4,unus:3,usag:6,use:5,used:[1,2,3,4],using:[1,2,3,4],util:[0,3,7],valu:[1,2,3,4,5],values_list:5,var_id:1,variabl:[1,2,3,4,5],variable_cardin:4,variable_cim_xu_marginal_likelihood_q:1,variable_cim_xu_marginal_likelihood_theta:1,variable_label:4,variables_kei:4,variables_label:4,vector:[1,3],want:5,when:1,where:[1,4],which:[1,2,3,4],whl:5,who:1,without:[1,2],word:1,you:[1,4,5],your:6},titles:["PyCTBN package","PyCTBN.estimators package","PyCTBN.optimizers package","PyCTBN.structure_graph package","PyCTBN.utility package","Examples","Welcome to PyCTBN\u2019s documentation!","PyCTBN"],titleterms:{"class":[0,1,2,3,4,7],"import":5,abstract_import:4,abstract_sample_path:3,cach:4,conditional_intensity_matrix:3,constraint_based_optim:2,content:[0,1,2,3,4],data:5,decor:4,document:6,estim:[1,5],exampl:5,fam_score_calcul:1,hill_climbing_search:2,implement:5,indic:6,instal:5,json_import:4,modul:[0,1,2,3,4],network_graph:3,optim:2,own:5,packag:[0,1,2,3,4],paramet:5,parameters_estim:1,pyctbn:6,sample_import:4,sample_path:3,set_of_cim:3,sets_of_cims_contain:3,structur:[3,5],structure_constraint_based_estim:1,structure_estim:1,structure_graph:3,structure_score_based_estim:1,submodul:[1,2,3,4],subpackag:0,tabl:6,tabu_search:2,trajectori:3,usag:5,util:4,welcom:6,your:5}})