Index

A

AbstractExporter (class in PyCTBN.PyCTBN.utility.abstract_exporter) AbstractImporter (class in PyCTBN.PyCTBN.utility.abstract_importer) actual_cims (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims property) add_edge() (PyCTBN.PyCTBN.structure_graph.structure.Structure method) add_edges() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) add_nodes() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) add_trajectory() (PyCTBN.PyCTBN.utility.abstract_exporter.AbstractExporter method) adjacency_matrix() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method)

another_filtering_method() (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims method) aux_build_p_combs_structure() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) aux_build_time_columns_filtering_structure_for_a_node() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) aux_build_time_scalar_indexing_structure_for_a_node() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) aux_build_transition_columns_filtering_structure() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) aux_build_transition_scalar_indexing_structure_for_a_node() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) aux_import_sampled_cims() (PyCTBN.tests.estimators.test_parameters_estimator.TestParametersEstimatior method) aux_test_build_cims() (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims method) aux_test_init() (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims method)

B

build_cims() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method) build_complete_graph() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator static method) build_list_of_samples_array() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method) build_p_comb_structure_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method) (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims method) build_removable_edges_matrix() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method) build_sorter() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method) (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) (PyCTBN.PyCTBN.utility.sample_importer.SampleImporter method)

build_structure() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath method) build_time_columns_filtering_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method) build_time_scalar_indexing_structure_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method) build_times_and_transitions_structures() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method) build_trajectories() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath method) build_transition_filtering_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method) build_transition_scalar_indexing_structure_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method)

C

Cache (class in PyCTBN.PyCTBN.utility.cache) cim (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix property) cim_equality_test() (PyCTBN.tests.estimators.test_parameters_estimator.TestParametersEstimatior method) cims (PyCTBN.PyCTBN.structure_graph.network_generator.NetworkGenerator property) cims_to_json() (PyCTBN.PyCTBN.utility.json_exporter.JsonExporter method) clean_structure_edges() (PyCTBN.PyCTBN.structure_graph.structure.Structure method) clear() (PyCTBN.PyCTBN.utility.cache.Cache method) clear_concatenated_frame() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method) clear_data_frame_list() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) clear_indexing_filtering_structures() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) clear_memory() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath method) complete_test() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method) complete_trajectory (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory property)

compute_cim_coefficients() (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix method) compute_parameters_for_node() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator method) compute_row_delta_in_all_samples_frames() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method) compute_row_delta_sigle_samples_frame() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method) compute_state_res_time_for_node() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator static method) compute_state_transitions_for_a_node() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator static method) compute_thumb_value() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method) concatenated_samples (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property) ConditionalIntensityMatrix (class in PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix) ConstraintBasedOptimizer (class in PyCTBN.PyCTBN.optimizers.constraint_based_optimizer) contains_edge() (PyCTBN.PyCTBN.structure_graph.structure.Structure method) CTBN_Sample() (PyCTBN.PyCTBN.structure_graph.trajectory_generator.TrajectoryGenerator method) ctpc_algorithm() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)

D

dataset_id() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method) (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) (PyCTBN.PyCTBN.utility.sample_importer.SampleImporter method)

dyn_str (PyCTBN.PyCTBN.structure_graph.network_generator.NetworkGenerator property)

E

edges (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) (PyCTBN.PyCTBN.structure_graph.structure.Structure property) equality_of_cims_of_node() (PyCTBN.tests.estimators.test_parameters_estimator.TestParametersEstimatior method) estimate_parents() (PyCTBN.PyCTBN.estimators.structure_score_based_estimator.StructureScoreBasedEstimator method)

estimate_structure() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method) (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method) (PyCTBN.PyCTBN.estimators.structure_score_based_estimator.StructureScoreBasedEstimator method) example module

F

FamScoreCalculator (class in PyCTBN.PyCTBN.estimators.fam_score_calculator) fast_init() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator method) (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)

file_path (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property) filter_cims_with_mask() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method) find() (PyCTBN.PyCTBN.utility.cache.Cache method)

G

generate_cims() (PyCTBN.PyCTBN.structure_graph.network_generator.NetworkGenerator method) generate_graph() (PyCTBN.PyCTBN.structure_graph.network_generator.NetworkGenerator method) generate_possible_sub_sets_of_size() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator static method) get_cims_number() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method) get_fam_score() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method) get_node_id() (PyCTBN.PyCTBN.structure_graph.structure.Structure method) get_node_indx() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) (PyCTBN.PyCTBN.structure_graph.structure.Structure method)

get_ordered_by_indx_set_of_parents() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) get_parents_by_id() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) get_positional_node_indx() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) (PyCTBN.PyCTBN.structure_graph.structure.Structure method) get_score_from_graph() (PyCTBN.PyCTBN.estimators.structure_score_based_estimator.StructureScoreBasedEstimator method) get_states_number() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) (PyCTBN.PyCTBN.structure_graph.structure.Structure method) graph (PyCTBN.PyCTBN.structure_graph.network_generator.NetworkGenerator property)

H

has_edge() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)

has_prior_net_structure (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property) HillClimbing (class in PyCTBN.PyCTBN.optimizers.hill_climbing_search)

I

import_data() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) (PyCTBN.PyCTBN.utility.sample_importer.SampleImporter method) import_sampled_cims() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)

import_structure() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) import_trajectories() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) import_variables() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) independence_test() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)

J

JsonExporter (class in PyCTBN.PyCTBN.utility.json_exporter)

JsonImporter (class in PyCTBN.PyCTBN.utility.json_importer)

M

main() (in module example) marginal_likelihood_q() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method) marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method) module example PyCTBN PyCTBN.PyCTBN PyCTBN.PyCTBN.estimators PyCTBN.PyCTBN.estimators.fam_score_calculator PyCTBN.PyCTBN.estimators.parameters_estimator PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator PyCTBN.PyCTBN.estimators.structure_estimator PyCTBN.PyCTBN.estimators.structure_score_based_estimator PyCTBN.PyCTBN.optimizers PyCTBN.PyCTBN.optimizers.constraint_based_optimizer PyCTBN.PyCTBN.optimizers.hill_climbing_search PyCTBN.PyCTBN.optimizers.optimizer PyCTBN.PyCTBN.optimizers.tabu_search PyCTBN.PyCTBN.structure_graph PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix PyCTBN.PyCTBN.structure_graph.network_generator PyCTBN.PyCTBN.structure_graph.network_graph PyCTBN.PyCTBN.structure_graph.sample_path PyCTBN.PyCTBN.structure_graph.set_of_cims PyCTBN.PyCTBN.structure_graph.structure PyCTBN.PyCTBN.structure_graph.trajectory PyCTBN.PyCTBN.structure_graph.trajectory_generator PyCTBN.PyCTBN.utility PyCTBN.PyCTBN.utility.abstract_exporter PyCTBN.PyCTBN.utility.abstract_importer PyCTBN.PyCTBN.utility.cache PyCTBN.PyCTBN.utility.json_exporter PyCTBN.PyCTBN.utility.json_importer PyCTBN.PyCTBN.utility.sample_importer PyCTBN.tests PyCTBN.tests.estimators PyCTBN.tests.estimators.test_parameters_estimator PyCTBN.tests.estimators.test_structure_estimator PyCTBN.tests.optimizers PyCTBN.tests.structure_graph PyCTBN.tests.structure_graph.test_cim PyCTBN.tests.structure_graph.test_networkgraph PyCTBN.tests.structure_graph.test_sample_path PyCTBN.tests.structure_graph.test_setofcims PyCTBN.tests.structure_graph.test_structure PyCTBN.tests.structure_graph.test_trajectory PyCTBN.tests.utility PyCTBN.tests.utility.test_cache PyCTBN.tests.utility.test_json_importer PyCTBN.tests.utility.test_sample_importer

multi_trajectory() (PyCTBN.PyCTBN.structure_graph.trajectory_generator.TrajectoryGenerator method)

N

NetworkGenerator (class in PyCTBN.PyCTBN.structure_graph.network_generator) NetworkGraph (class in PyCTBN.PyCTBN.structure_graph.network_graph) nodes (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) nodes_indexes (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) (PyCTBN.PyCTBN.structure_graph.structure.Structure property)

nodes_labels (PyCTBN.PyCTBN.structure_graph.structure.Structure property) nodes_values (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) (PyCTBN.PyCTBN.structure_graph.structure.Structure property) normalize_trajectories() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)

O

one_iteration_of_CTPC_algorithm() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method) one_level_normalizing() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) optimize_structure() (PyCTBN.PyCTBN.optimizers.constraint_based_optimizer.ConstraintBasedOptimizer method) (PyCTBN.PyCTBN.optimizers.hill_climbing_search.HillClimbing method) (PyCTBN.PyCTBN.optimizers.optimizer.Optimizer method) (PyCTBN.PyCTBN.optimizers.tabu_search.TabuSearch method)

Optimizer (class in PyCTBN.PyCTBN.optimizers.optimizer) ordered() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) (PyCTBN.tests.utility.test_sample_importer.TestSampleImporter method) out_file() (PyCTBN.PyCTBN.utility.abstract_exporter.AbstractExporter method) (PyCTBN.PyCTBN.utility.json_exporter.JsonExporter method)

P

p_combs (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims property) ParametersEstimator (class in PyCTBN.PyCTBN.estimators.parameters_estimator) put() (PyCTBN.PyCTBN.utility.cache.Cache method) PyCTBN module PyCTBN.PyCTBN module PyCTBN.PyCTBN.estimators module PyCTBN.PyCTBN.estimators.fam_score_calculator module PyCTBN.PyCTBN.estimators.parameters_estimator module PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator module PyCTBN.PyCTBN.estimators.structure_estimator module PyCTBN.PyCTBN.estimators.structure_score_based_estimator module PyCTBN.PyCTBN.optimizers module PyCTBN.PyCTBN.optimizers.constraint_based_optimizer module PyCTBN.PyCTBN.optimizers.hill_climbing_search module PyCTBN.PyCTBN.optimizers.optimizer module PyCTBN.PyCTBN.optimizers.tabu_search module PyCTBN.PyCTBN.structure_graph module PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix module PyCTBN.PyCTBN.structure_graph.network_generator module PyCTBN.PyCTBN.structure_graph.network_graph module PyCTBN.PyCTBN.structure_graph.sample_path module PyCTBN.PyCTBN.structure_graph.set_of_cims module PyCTBN.PyCTBN.structure_graph.structure module PyCTBN.PyCTBN.structure_graph.trajectory module PyCTBN.PyCTBN.structure_graph.trajectory_generator module

PyCTBN.PyCTBN.utility module PyCTBN.PyCTBN.utility.abstract_exporter module PyCTBN.PyCTBN.utility.abstract_importer module PyCTBN.PyCTBN.utility.cache module PyCTBN.PyCTBN.utility.json_exporter module PyCTBN.PyCTBN.utility.json_importer module PyCTBN.PyCTBN.utility.sample_importer module PyCTBN.tests module PyCTBN.tests.estimators module PyCTBN.tests.estimators.test_parameters_estimator module PyCTBN.tests.estimators.test_structure_estimator module PyCTBN.tests.optimizers module PyCTBN.tests.structure_graph module PyCTBN.tests.structure_graph.test_cim module PyCTBN.tests.structure_graph.test_networkgraph module PyCTBN.tests.structure_graph.test_sample_path module PyCTBN.tests.structure_graph.test_setofcims module PyCTBN.tests.structure_graph.test_structure module PyCTBN.tests.structure_graph.test_trajectory module PyCTBN.tests.utility module PyCTBN.tests.utility.test_cache module PyCTBN.tests.utility.test_json_importer module PyCTBN.tests.utility.test_sample_importer module

R

read_json_file() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method) remove_edge() (PyCTBN.PyCTBN.structure_graph.structure.Structure method)

remove_edges() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) remove_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method) (PyCTBN.PyCTBN.structure_graph.structure.Structure method)

S

SampleImporter (class in PyCTBN.PyCTBN.utility.sample_importer) SamplePath (class in PyCTBN.PyCTBN.structure_graph.sample_path) save_plot_estimated_structure_graph() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method) save_results() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method) SetOfCims (class in PyCTBN.PyCTBN.structure_graph.set_of_cims) setUpClass() (PyCTBN.tests.estimators.test_parameters_estimator.TestParametersEstimatior class method) (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator class method) (PyCTBN.tests.structure_graph.test_cim.TestConditionalIntensityMatrix class method) (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph class method) (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath class method) (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims class method) (PyCTBN.tests.structure_graph.test_structure.TestStructure class method) (PyCTBN.tests.structure_graph.test_trajectory.TestTrajectory class method) (PyCTBN.tests.utility.test_json_importer.TestJsonImporter class method) (PyCTBN.tests.utility.test_sample_importer.TestSampleImporter class method)

single_cim_xu_marginal_likelihood_q() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method) single_cim_xu_marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method) single_internal_cim_xxu_marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method) size() (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory method) sorter (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property) spurious_edges() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method) state_residence_times (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix property) state_transition_matrix (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix property) Structure (class in PyCTBN.PyCTBN.structure_graph.structure) structure (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property) (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property) StructureConstraintBasedEstimator (class in PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator) StructureEstimator (class in PyCTBN.PyCTBN.estimators.structure_estimator) StructureScoreBasedEstimator (class in PyCTBN.PyCTBN.estimators.structure_score_based_estimator)

T

TabuSearch (class in PyCTBN.PyCTBN.optimizers.tabu_search) test_add_edges() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_add_nodes() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_adjacency_matrix() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) test_buid_samplepath_no_concatenated_samples() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_buid_samplepath_no_variables() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_build_cims() (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims method) test_build_complete_graph() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) test_build_p_combs_structure() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_build_removable_edges_matrix() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) test_build_saplepath_no_prior_net_structure() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_build_sorter() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_build_structure() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_build_structure_bad_sorter() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_build_time_columns_filtering_structure_for_a_node() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_build_time_scalar_indexing_structure_for_a_node() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_build_trajectories() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_build_transition_columns_filtering_structure() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_build_transition_scalar_indexing_structure_for_a_node() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_clear() (PyCTBN.tests.utility.test_cache.TestCache method) test_clear_concatenated_frame() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_clear_data_frame_list() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_compute_cim_coefficients() (PyCTBN.tests.structure_graph.test_cim.TestConditionalIntensityMatrix method) test_compute_parameters_for_node() (PyCTBN.tests.estimators.test_parameters_estimator.TestParametersEstimatior method) test_compute_row_delta_in_all_frames() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_compute_row_delta_in_all_frames_not_init_sorter() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_compute_row_delta_single_samples_frame() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_dataset_id() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_edges_operations() (PyCTBN.tests.structure_graph.test_structure.TestStructure method) test_equality() (PyCTBN.tests.structure_graph.test_structure.TestStructure method) test_fast_init() (PyCTBN.tests.estimators.test_parameters_estimator.TestParametersEstimatior method) (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_file_path() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_filter_cims_with_mask() (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims method) test_find() (PyCTBN.tests.utility.test_cache.TestCache method) test_generate_possible_sub_sets_of_size() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) test_get_node_id() (PyCTBN.tests.structure_graph.test_structure.TestStructure method) test_get_node_indx() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) (PyCTBN.tests.structure_graph.test_structure.TestStructure method) test_get_ordered_by_indx_set_of_parents() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_get_parents_by_id() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) test_get_positional_node_indx() (PyCTBN.tests.structure_graph.test_structure.TestStructure method) test_get_states_number() (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) (PyCTBN.tests.structure_graph.test_structure.TestStructure method) test_import_data() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_import_sampled_cims() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_import_structure() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method)

test_import_variables() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_init() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) (PyCTBN.tests.structure_graph.test_cim.TestConditionalIntensityMatrix method) (PyCTBN.tests.structure_graph.test_networkgraph.TestNetworkGraph method) (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) (PyCTBN.tests.structure_graph.test_setofcims.TestSetOfCims method) (PyCTBN.tests.structure_graph.test_structure.TestStructure method) (PyCTBN.tests.structure_graph.test_trajectory.TestTrajectory method) (PyCTBN.tests.utility.test_cache.TestCache method) (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) (PyCTBN.tests.utility.test_sample_importer.TestSampleImporter method) test_init_not_filled_dataframse() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_init_not_initialized_importer() (PyCTBN.tests.structure_graph.test_sample_path.TestSamplePath method) test_normalize_trajectories() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_normalize_trajectories_wrong_indx() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_normalize_trajectories_wrong_key() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_order() (PyCTBN.tests.utility.test_sample_importer.TestSampleImporter method) test_put() (PyCTBN.tests.utility.test_cache.TestCache method) test_read_json_file_found() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_read_json_file_not_found() (PyCTBN.tests.utility.test_json_importer.TestJsonImporter method) test_repr() (PyCTBN.tests.structure_graph.test_cim.TestConditionalIntensityMatrix method) (PyCTBN.tests.structure_graph.test_structure.TestStructure method) test_save_plot_estimated_graph() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) test_save_results() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) test_time() (PyCTBN.tests.estimators.test_structure_estimator.TestStructureEstimator method) TestCache (class in PyCTBN.tests.utility.test_cache) TestConditionalIntensityMatrix (class in PyCTBN.tests.structure_graph.test_cim) TestJsonImporter (class in PyCTBN.tests.utility.test_json_importer) TestNetworkGraph (class in PyCTBN.tests.structure_graph.test_networkgraph) TestParametersEstimatior (class in PyCTBN.tests.estimators.test_parameters_estimator) TestSampleImporter (class in PyCTBN.tests.utility.test_sample_importer) TestSamplePath (class in PyCTBN.tests.structure_graph.test_sample_path) TestSetOfCims (class in PyCTBN.tests.structure_graph.test_setofcims) TestStructure (class in PyCTBN.tests.structure_graph.test_structure) TestStructureEstimator (class in PyCTBN.tests.estimators.test_structure_estimator) TestTrajectory (class in PyCTBN.tests.structure_graph.test_trajectory) time_filtering (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) time_scalar_indexing_strucure (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) times (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory property) total_variables_count (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property) total_variables_number (PyCTBN.PyCTBN.structure_graph.structure.Structure property) trajectories (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property) Trajectory (class in PyCTBN.PyCTBN.structure_graph.trajectory) trajectory (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory property) TrajectoryGenerator (class in PyCTBN.PyCTBN.structure_graph.trajectory_generator) transition_filtering (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property) transition_scalar_indexing_structure (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)

V

variable_cim_xu_marginal_likelihood_q() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method) variable_cim_xu_marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)

variables (PyCTBN.PyCTBN.structure_graph.network_generator.NetworkGenerator property) (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property)

W

worker() (PyCTBN.PyCTBN.structure_graph.trajectory_generator.TrajectoryGenerator method)