import sys sys.path.append("../classes/") import unittest import numpy as np import glob import os import network_graph as ng import sample_path as sp import set_of_cims as sofc import parameters_estimator as pe import json_importer as ji class TestParametersEstimatior(unittest.TestCase): @classmethod def setUpClass(cls) -> None: cls.read_files = glob.glob(os.path.join('../data', "*.json")) cls.array_indx = 8 cls.importer = ji.JsonImporter(cls.read_files[0], 'samples', 'dyn.str', 'variables', 'Time', 'Name', cls.array_indx) cls.s1 = sp.SamplePath(cls.importer) cls.s1.build_trajectories() cls.s1.build_structure() print(cls.s1.structure.edges) print(cls.s1.structure.nodes_values) cls.g1 = ng.NetworkGraph(cls.s1.structure) cls.g1.init_graph() def test_fast_init(self): for node in self.g1.nodes: g = ng.NetworkGraph(self.s1.structure) g.fast_init(node) p1 = pe.ParametersEstimator(self.s1.trajectories, g) self.assertEqual(p1._trajectories, self.s1.trajectories) self.assertEqual(p1._net_graph, g) self.assertIsNone(p1._single_set_of_cims) p1.fast_init(node) self.assertIsInstance(p1._single_set_of_cims, sofc.SetOfCims) def test_compute_parameters_for_node(self): for indx, node in enumerate(self.g1.nodes): print(node) g = ng.NetworkGraph(self.s1.structure) g.fast_init(node) p1 = pe.ParametersEstimator(self.s1.trajectories, g) p1.fast_init(node) sofc1 = p1.compute_parameters_for_node(node) sampled_cims = self.aux_import_sampled_cims('dyn.cims') sc = list(sampled_cims.values()) self.equality_of_cims_of_node(sc[indx], sofc1._actual_cims) def equality_of_cims_of_node(self, sampled_cims, estimated_cims): self.assertEqual(len(sampled_cims), len(estimated_cims)) for c1, c2 in zip(sampled_cims, estimated_cims): self.cim_equality_test(c1, c2.cim) def cim_equality_test(self, cim1, cim2): for r1, r2 in zip(cim1, cim2): self.assertTrue(np.all(np.isclose(r1, r2, 1e-01, 1e-01) == True)) def aux_import_sampled_cims(self, cims_label): i1 = ji.JsonImporter(self.read_files[0], '', '', '', '', '', self.array_indx) raw_data = i1.read_json_file() return i1.import_sampled_cims(raw_data, self.array_indx, cims_label) if __name__ == '__main__': unittest.main()