PyCTBN
Contents:
PyCTBN
PyCTBN.PyCTBN package
Examples
Porão do Juca
Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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M
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N
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O
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P
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R
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S
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T
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V
A
AbstractImporter (class in PyCTBN.PyCTBN.utility.abstract_importer)
actual_cims() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims property)
add_edge() (PyCTBN.PyCTBN.structure_graph.structure.Structure method)
add_edges() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
add_nodes() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
adjacency_matrix() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method)
B
build_cims() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method)
build_complete_graph() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator static method)
build_list_of_samples_array() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method)
build_p_comb_structure_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method)
build_removable_edges_matrix() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method)
build_sorter() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method)
(PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
(PyCTBN.PyCTBN.utility.sample_importer.SampleImporter method)
build_structure() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath method)
build_time_columns_filtering_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method)
build_time_scalar_indexing_structure_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method)
build_times_and_transitions_structures() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method)
build_trajectories() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath method)
build_transition_filtering_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method)
build_transition_scalar_indexing_structure_for_a_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph static method)
C
Cache (class in PyCTBN.PyCTBN.utility.cache)
cim() (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix property)
clean_structure_edges() (PyCTBN.PyCTBN.structure_graph.structure.Structure method)
clear() (PyCTBN.PyCTBN.utility.cache.Cache method)
clear_concatenated_frame() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method)
clear_data_frame_list() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
clear_indexing_filtering_structures() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
clear_memory() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath method)
complete_test() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)
complete_trajectory() (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory property)
compute_cim_coefficients() (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix method)
compute_parameters_for_node() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator method)
compute_row_delta_in_all_samples_frames() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method)
compute_row_delta_sigle_samples_frame() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method)
compute_state_res_time_for_node() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator static method)
compute_state_transitions_for_a_node() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator static method)
compute_thumb_value() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)
concatenated_samples() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property)
ConditionalIntensityMatrix (class in PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix)
ConstraintBasedOptimizer (class in PyCTBN.PyCTBN.optimizers.constraint_based_optimizer)
contains_edge() (PyCTBN.PyCTBN.structure_graph.structure.Structure method)
ctpc_algorithm() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)
D
dataset_id() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter method)
(PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
(PyCTBN.PyCTBN.utility.sample_importer.SampleImporter method)
E
edges() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
(PyCTBN.PyCTBN.structure_graph.structure.Structure property)
estimate_parents() (PyCTBN.PyCTBN.estimators.structure_score_based_estimator.StructureScoreBasedEstimator method)
estimate_structure() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)
(PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method)
(PyCTBN.PyCTBN.estimators.structure_score_based_estimator.StructureScoreBasedEstimator method)
F
FamScoreCalculator (class in PyCTBN.PyCTBN.estimators.fam_score_calculator)
fast_init() (PyCTBN.PyCTBN.estimators.parameters_estimator.ParametersEstimator method)
(PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
file_path() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property)
filter_cims_with_mask() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method)
find() (PyCTBN.PyCTBN.utility.cache.Cache method)
G
generate_possible_sub_sets_of_size() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator static method)
get_cims_number() (PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims method)
get_fam_score() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
get_node_id() (PyCTBN.PyCTBN.structure_graph.structure.Structure method)
get_node_indx() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
(PyCTBN.PyCTBN.structure_graph.structure.Structure method)
get_ordered_by_indx_set_of_parents() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
get_parents_by_id() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
get_positional_node_indx() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
(PyCTBN.PyCTBN.structure_graph.structure.Structure method)
get_score_from_graph() (PyCTBN.PyCTBN.estimators.structure_score_based_estimator.StructureScoreBasedEstimator method)
get_states_number() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
(PyCTBN.PyCTBN.structure_graph.structure.Structure method)
H
has_edge() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
has_prior_net_structure() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property)
HillClimbing (class in PyCTBN.PyCTBN.optimizers.hill_climbing_search)
I
import_data() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
(PyCTBN.PyCTBN.utility.sample_importer.SampleImporter method)
import_sampled_cims() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
import_structure() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
import_trajectories() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
import_variables() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
independence_test() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)
J
JsonImporter (class in PyCTBN.PyCTBN.utility.json_importer)
M
marginal_likelihood_q() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
module
PyCTBN
PyCTBN.PyCTBN
PyCTBN.PyCTBN.estimators
PyCTBN.PyCTBN.estimators.fam_score_calculator
PyCTBN.PyCTBN.estimators.parameters_estimator
PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator
PyCTBN.PyCTBN.estimators.structure_estimator
PyCTBN.PyCTBN.estimators.structure_score_based_estimator
PyCTBN.PyCTBN.optimizers
PyCTBN.PyCTBN.optimizers.constraint_based_optimizer
PyCTBN.PyCTBN.optimizers.hill_climbing_search
PyCTBN.PyCTBN.optimizers.optimizer
PyCTBN.PyCTBN.optimizers.tabu_search
PyCTBN.PyCTBN.structure_graph
PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix
PyCTBN.PyCTBN.structure_graph.network_graph
PyCTBN.PyCTBN.structure_graph.sample_path
PyCTBN.PyCTBN.structure_graph.set_of_cims
PyCTBN.PyCTBN.structure_graph.structure
PyCTBN.PyCTBN.structure_graph.trajectory
PyCTBN.PyCTBN.utility
PyCTBN.PyCTBN.utility.abstract_importer
PyCTBN.PyCTBN.utility.cache
PyCTBN.PyCTBN.utility.json_importer
PyCTBN.PyCTBN.utility.sample_importer
N
NetworkGraph (class in PyCTBN.PyCTBN.structure_graph.network_graph)
nodes() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
nodes_indexes() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
(PyCTBN.PyCTBN.structure_graph.structure.Structure property)
nodes_labels() (PyCTBN.PyCTBN.structure_graph.structure.Structure property)
nodes_values() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
(PyCTBN.PyCTBN.structure_graph.structure.Structure property)
normalize_trajectories() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
O
one_iteration_of_CTPC_algorithm() (PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator.StructureConstraintBasedEstimator method)
one_level_normalizing() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
optimize_structure() (PyCTBN.PyCTBN.optimizers.constraint_based_optimizer.ConstraintBasedOptimizer method)
(PyCTBN.PyCTBN.optimizers.hill_climbing_search.HillClimbing method)
(PyCTBN.PyCTBN.optimizers.optimizer.Optimizer method)
(PyCTBN.PyCTBN.optimizers.tabu_search.TabuSearch method)
Optimizer (class in PyCTBN.PyCTBN.optimizers.optimizer)
P
p_combs() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
(PyCTBN.PyCTBN.structure_graph.set_of_cims.SetOfCims property)
ParametersEstimator (class in PyCTBN.PyCTBN.estimators.parameters_estimator)
put() (PyCTBN.PyCTBN.utility.cache.Cache method)
PyCTBN
module
PyCTBN.PyCTBN
module
PyCTBN.PyCTBN.estimators
module
PyCTBN.PyCTBN.estimators.fam_score_calculator
module
PyCTBN.PyCTBN.estimators.parameters_estimator
module
PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator
module
PyCTBN.PyCTBN.estimators.structure_estimator
module
PyCTBN.PyCTBN.estimators.structure_score_based_estimator
module
PyCTBN.PyCTBN.optimizers
module
PyCTBN.PyCTBN.optimizers.constraint_based_optimizer
module
PyCTBN.PyCTBN.optimizers.hill_climbing_search
module
PyCTBN.PyCTBN.optimizers.optimizer
module
PyCTBN.PyCTBN.optimizers.tabu_search
module
PyCTBN.PyCTBN.structure_graph
module
PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix
module
PyCTBN.PyCTBN.structure_graph.network_graph
module
PyCTBN.PyCTBN.structure_graph.sample_path
module
PyCTBN.PyCTBN.structure_graph.set_of_cims
module
PyCTBN.PyCTBN.structure_graph.structure
module
PyCTBN.PyCTBN.structure_graph.trajectory
module
PyCTBN.PyCTBN.utility
module
PyCTBN.PyCTBN.utility.abstract_importer
module
PyCTBN.PyCTBN.utility.cache
module
PyCTBN.PyCTBN.utility.json_importer
module
PyCTBN.PyCTBN.utility.sample_importer
module
R
read_json_file() (PyCTBN.PyCTBN.utility.json_importer.JsonImporter method)
remove_edge() (PyCTBN.PyCTBN.structure_graph.structure.Structure method)
remove_edges() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
remove_node() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph method)
(PyCTBN.PyCTBN.structure_graph.structure.Structure method)
S
SampleImporter (class in PyCTBN.PyCTBN.utility.sample_importer)
SamplePath (class in PyCTBN.PyCTBN.structure_graph.sample_path)
save_plot_estimated_structure_graph() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method)
save_results() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method)
SetOfCims (class in PyCTBN.PyCTBN.structure_graph.set_of_cims)
single_cim_xu_marginal_likelihood_q() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
single_cim_xu_marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
single_internal_cim_xxu_marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
size() (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory method)
sorter() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property)
spurious_edges() (PyCTBN.PyCTBN.estimators.structure_estimator.StructureEstimator method)
state_residence_times() (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix property)
state_transition_matrix() (PyCTBN.PyCTBN.structure_graph.conditional_intensity_matrix.ConditionalIntensityMatrix property)
Structure (class in PyCTBN.PyCTBN.structure_graph.structure)
structure() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property)
(PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property)
StructureConstraintBasedEstimator (class in PyCTBN.PyCTBN.estimators.structure_constraint_based_estimator)
StructureEstimator (class in PyCTBN.PyCTBN.estimators.structure_estimator)
StructureScoreBasedEstimator (class in PyCTBN.PyCTBN.estimators.structure_score_based_estimator)
T
TabuSearch (class in PyCTBN.PyCTBN.optimizers.tabu_search)
time_filtering() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
time_scalar_indexing_strucure() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
times() (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory property)
total_variables_count() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property)
total_variables_number() (PyCTBN.PyCTBN.structure_graph.structure.Structure property)
trajectories() (PyCTBN.PyCTBN.structure_graph.sample_path.SamplePath property)
Trajectory (class in PyCTBN.PyCTBN.structure_graph.trajectory)
trajectory() (PyCTBN.PyCTBN.structure_graph.trajectory.Trajectory property)
transition_filtering() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
transition_scalar_indexing_structure() (PyCTBN.PyCTBN.structure_graph.network_graph.NetworkGraph property)
V
variable_cim_xu_marginal_likelihood_q() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
variable_cim_xu_marginal_likelihood_theta() (PyCTBN.PyCTBN.estimators.fam_score_calculator.FamScoreCalculator method)
variables() (PyCTBN.PyCTBN.utility.abstract_importer.AbstractImporter property)