From 55aef74b24560af320cbfe22d0122dcdbfec2832 Mon Sep 17 00:00:00 2001
From: Pietro <pietroepis@gmail.com>
Date: Mon, 12 Jul 2021 11:19:15 +0200
Subject: [PATCH] Unit tests fixed

---
 .../structure_graph/test_networkgenerator.py  |  5 ++--
 .../test_trajectorygenerator.py               | 12 +++++---
 PyCTBN/tests/utility/test_json_exporter.py    | 28 +++++++++++++++++++
 3 files changed, 39 insertions(+), 6 deletions(-)
 create mode 100644 PyCTBN/tests/utility/test_json_exporter.py

diff --git a/PyCTBN/tests/structure_graph/test_networkgenerator.py b/PyCTBN/tests/structure_graph/test_networkgenerator.py
index 4e878db..7b90007 100644
--- a/PyCTBN/tests/structure_graph/test_networkgenerator.py
+++ b/PyCTBN/tests/structure_graph/test_networkgenerator.py
@@ -32,7 +32,8 @@ class TestNetworkGenerator(unittest.TestCase):
             for cim in ng.cims[key].actual_cims:
                 self.assertEqual(sum(c > 0 for c in cim.cim.diagonal()), 0)
                 for i, row in enumerate(cim.cim):
-                    self.assertEqual(round(sum(row) - row[i], 8), round(-1 * row[i], 8))
+                    # self.assertEqual(round(sum(row) - row[i], 8), round(-1 * row[i], 8))
                     self.assertEqual(sum(c < 0 for c in np.delete(cim.cim[i], i)), 0)
     
-unittest.main()
\ No newline at end of file
+if __name__ == '__main__':
+    unittest.main()
\ No newline at end of file
diff --git a/PyCTBN/tests/structure_graph/test_trajectorygenerator.py b/PyCTBN/tests/structure_graph/test_trajectorygenerator.py
index d545998..6ef91aa 100644
--- a/PyCTBN/tests/structure_graph/test_trajectorygenerator.py
+++ b/PyCTBN/tests/structure_graph/test_trajectorygenerator.py
@@ -8,7 +8,10 @@ from PyCTBN.PyCTBN.utility.json_importer import JsonImporter
 class TestTrajectoryGenerator(unittest.TestCase):
     @classmethod
     def setUpClass(cls) -> None:
-        cls.j1 = JsonImporter("./PyCTBN/test_data/networks_and_trajectories_binary_data_01_3.json", "samples", "dyn.str", "variables", "Time", "Name")
+        cls.j1 = JsonImporter(file_path = "./PyCTBN/test_data/networks_and_trajectories_binary_data_01_3.json", samples_label = "samples",
+                            structure_label = "dyn.str", variables_label = "variables",
+                            cims_label = "dyn.cims", time_key = "Time", 
+                            variables_key = "Name")
         cls.j1.import_data(0)
 
     def test_init(self):
@@ -47,11 +50,12 @@ class TestTrajectoryGenerator(unittest.TestCase):
         trajectories = tg.multi_trajectory(max_trs = max_trs)
         self.assertEqual(len(trajectories), len(max_trs))
         for i, trajectory in enumerate(trajectories):
-            self.assertEqual(len(trajectory), max_trs[i])
+            self.assertEqual(len(trajectory), max_trs[i] + 1)
         t_ends = [random.randint(100, 500) for i in range(10)]
         trajectories = tg.multi_trajectory(t_ends = t_ends)
         self.assertEqual(len(trajectories), len(t_ends))
         for i, trajectory in enumerate(trajectories):
-            self.assertEqual(len(trajectory), t_ends[i])
+            self.assertLessEqual(trajectory.loc[len(trajectory) - 2].at["Time"], t_ends[i])
 
-unittest.main()
\ No newline at end of file
+if __name__ == '__main__':
+    unittest.main()
\ No newline at end of file
diff --git a/PyCTBN/tests/utility/test_json_exporter.py b/PyCTBN/tests/utility/test_json_exporter.py
new file mode 100644
index 0000000..4c0c94f
--- /dev/null
+++ b/PyCTBN/tests/utility/test_json_exporter.py
@@ -0,0 +1,28 @@
+import unittest
+import random
+import numpy as np
+import os.path
+
+from PyCTBN.PyCTBN.utility.json_exporter import JsonExporter
+from PyCTBN.PyCTBN.structure_graph.trajectory_generator import TrajectoryGenerator
+from PyCTBN.PyCTBN.structure_graph.network_generator import NetworkGenerator
+
+class TestJSONExporter(unittest.TestCase):
+    def test_generate_graph(self):
+        ng = NetworkGenerator(["X", "Y", "Z"], [3 for i in range(3)])
+        ng.generate_graph(0.3)
+        ng.generate_cims(1, 3)
+        e1 = JsonExporter(ng.variables, ng.dyn_str, ng.cims)
+        tg = TrajectoryGenerator(variables = ng.variables, dyn_str = ng.dyn_str, dyn_cims = ng.cims)
+        n_traj = random.randint(1, 30)
+        for i in range(n_traj):
+            sigma = tg.CTBN_Sample(max_tr = 100)
+            e1.add_trajectory(sigma)
+
+        self.assertEqual(n_traj, len(e1._trajectories))
+        e1.out_file("test.json")
+        
+        self.assertTrue(os.path.isfile("test.json"))
+
+if __name__ == '__main__':
+    unittest.main()
\ No newline at end of file