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Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍 https://github.com/madlabunimib/PyCTBN
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PyCTBN/main_package/classes/structure.py

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import typing as ty
import numpy as np
class Structure:
"""
Contains all the infos about the network structure(nodes names, nodes caridinalites, edges...)
:nodes_labels_list: the symbolic names of the variables
:nodes_indexes_arr: the indexes of the nodes
:nodes_vals_arr: the cardinalites of the nodes
:edges_list: the edges of the network
:total_variables_number: the total number of variables in the net
"""
def __init__(self, nodes_label_list: ty.List, node_indexes_arr: np.ndarray, nodes_vals_arr: np.ndarray,
edges_list: ty.List, total_variables_number: int):
self._nodes_labels_list = nodes_label_list
self._nodes_indexes_arr = node_indexes_arr
self._nodes_vals_arr = nodes_vals_arr
self._edges_list = edges_list
self._total_variables_number = total_variables_number
@property
def edges(self):
#records = self.structure_frame.to_records(index=False)
#edges_list = list(records)
return self._edges_list
@property
def nodes_labels(self):
return self._nodes_labels_list
@property
def nodes_indexes(self) -> np.ndarray:
return self._nodes_indexes_arr
@property
def nodes_values(self) -> np.ndarray:
return self._nodes_vals_arr
@property
def total_variables_number(self):
return self._total_variables_number
def get_node_id(self, node_indx: int) -> str:
return self._nodes_labels_list[node_indx]
def get_node_indx(self, node_id: str) -> int:
pos_indx = self._nodes_labels_list.index(node_id)
return self._nodes_indexes_arr[pos_indx]
def get_positional_node_indx(self, node_id: str) -> int:
return self._nodes_labels_list.index(node_id)
def get_states_number(self, node: str) -> int:
pos_indx = self._nodes_labels_list.index(node)
return self._nodes_vals_arr[pos_indx]
def __repr__(self):
return "Variables:\n" + str(self._nodes_labels_list) +"\nValues:\n"+ str(self._nodes_vals_arr) +\
"\nEdges: \n" + str(self._edges_list)
def __eq__(self, other):
"""Overrides the default implementation"""
if isinstance(other, Structure):
return set(self._nodes_labels_list) == set(other._nodes_labels_list) and \
np.array_equal(self._nodes_vals_arr, other._nodes_vals_arr) and \
np.array_equal(self._nodes_indexes_arr, other._nodes_indexes_arr) and \
self._edges_list == other._edges_list
return NotImplemented
4 years ago