Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍
https://github.com/madlabunimib/PyCTBN
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94 lines
3.2 KiB
94 lines
3.2 KiB
4 years ago
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from os.path import join, dirname
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import glob
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def configuration(parent_package='', top_path=None):
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from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
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from numpy.distutils.misc_util import get_info as get_misc_info
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from scipy._build_utils.system_info import get_info
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from scipy._build_utils import combine_dict, uses_blas64
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from scipy._build_utils.compiler_helper import set_cxx_flags_hook
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from distutils.sysconfig import get_python_inc
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config = Configuration('spatial', parent_package, top_path)
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config.add_data_dir('tests')
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# spatial.transform
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config.add_subpackage('transform')
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# qhull
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qhull_src = sorted(glob.glob(join(dirname(__file__), 'qhull_src',
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'src', '*.c')))
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inc_dirs = [get_python_inc()]
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if inc_dirs[0] != get_python_inc(plat_specific=1):
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inc_dirs.append(get_python_inc(plat_specific=1))
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inc_dirs.append(get_numpy_include_dirs())
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inc_dirs.append(join(dirname(dirname(__file__)), '_lib'))
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inc_dirs.append(join(dirname(dirname(__file__)), '_build_utils', 'src'))
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if uses_blas64():
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lapack_opt = get_info('lapack_ilp64_opt')
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else:
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lapack_opt = get_info('lapack_opt')
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cfg = combine_dict(lapack_opt, include_dirs=inc_dirs)
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config.add_extension('qhull',
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sources=['qhull.c', 'qhull_misc.c'] + qhull_src,
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**cfg)
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# cKDTree
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ckdtree_src = ['query.cxx',
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'build.cxx',
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'query_pairs.cxx',
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'count_neighbors.cxx',
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'query_ball_point.cxx',
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'query_ball_tree.cxx',
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'sparse_distances.cxx']
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ckdtree_src = [join('ckdtree', 'src', x) for x in ckdtree_src]
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ckdtree_headers = ['ckdtree_decl.h',
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'coo_entries.h',
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'distance_base.h',
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'distance.h',
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'ordered_pair.h',
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'partial_sort.h',
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'rectangle.h']
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ckdtree_headers = [join('ckdtree', 'src', x) for x in ckdtree_headers]
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ckdtree_dep = ['ckdtree.cxx'] + ckdtree_headers + ckdtree_src
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ext = config.add_extension('ckdtree',
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sources=['ckdtree.cxx'] + ckdtree_src,
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depends=ckdtree_dep,
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include_dirs=inc_dirs + [join('ckdtree', 'src')])
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ext._pre_build_hook = set_cxx_flags_hook
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# _distance_wrap
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config.add_extension('_distance_wrap',
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sources=[join('src', 'distance_wrap.c')],
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depends=[join('src', 'distance_impl.h')],
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include_dirs=[get_numpy_include_dirs()],
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extra_info=get_misc_info("npymath"))
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config.add_extension('_voronoi',
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sources=['_voronoi.c'])
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config.add_extension('_hausdorff',
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sources=['_hausdorff.c'])
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# Add license files
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config.add_data_files('qhull_src/COPYING.txt')
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# Type stubs
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config.add_data_files('*.pyi')
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return config
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if __name__ == '__main__':
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from numpy.distutils.core import setup
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setup(**configuration(top_path='').todict())
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