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Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍 https://github.com/madlabunimib/PyCTBN
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PyCTBN/venv/lib/python3.9/site-packages/pandas/plotting/_matplotlib/timeseries.py

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# TODO: Use the fact that axis can have units to simplify the process
import functools
from typing import TYPE_CHECKING, Optional
import numpy as np
from pandas._libs.tslibs import BaseOffset, Period, to_offset
from pandas._libs.tslibs.dtypes import FreqGroup
from pandas._typing import FrameOrSeriesUnion
from pandas.core.dtypes.generic import (
ABCDatetimeIndex,
ABCPeriodIndex,
ABCTimedeltaIndex,
)
from pandas.io.formats.printing import pprint_thing
from pandas.plotting._matplotlib.converter import (
TimeSeries_DateFormatter,
TimeSeries_DateLocator,
TimeSeries_TimedeltaFormatter,
)
from pandas.tseries.frequencies import get_period_alias, is_subperiod, is_superperiod
if TYPE_CHECKING:
from pandas import Index, Series # noqa:F401
# ---------------------------------------------------------------------
# Plotting functions and monkey patches
def _maybe_resample(series: "Series", ax, kwargs):
# resample against axes freq if necessary
freq, ax_freq = _get_freq(ax, series)
if freq is None: # pragma: no cover
raise ValueError("Cannot use dynamic axis without frequency info")
# Convert DatetimeIndex to PeriodIndex
if isinstance(series.index, ABCDatetimeIndex):
series = series.to_period(freq=freq)
if ax_freq is not None and freq != ax_freq:
if is_superperiod(freq, ax_freq): # upsample input
series = series.copy()
series.index = series.index.asfreq(ax_freq, how="s") # type: ignore
freq = ax_freq
elif _is_sup(freq, ax_freq): # one is weekly
how = kwargs.pop("how", "last")
series = getattr(series.resample("D"), how)().dropna()
series = getattr(series.resample(ax_freq), how)().dropna()
freq = ax_freq
elif is_subperiod(freq, ax_freq) or _is_sub(freq, ax_freq):
_upsample_others(ax, freq, kwargs)
else: # pragma: no cover
raise ValueError("Incompatible frequency conversion")
return freq, series
def _is_sub(f1, f2):
return (f1.startswith("W") and is_subperiod("D", f2)) or (
f2.startswith("W") and is_subperiod(f1, "D")
)
def _is_sup(f1, f2):
return (f1.startswith("W") and is_superperiod("D", f2)) or (
f2.startswith("W") and is_superperiod(f1, "D")
)
def _upsample_others(ax, freq, kwargs):
legend = ax.get_legend()
lines, labels = _replot_ax(ax, freq, kwargs)
_replot_ax(ax, freq, kwargs)
other_ax = None
if hasattr(ax, "left_ax"):
other_ax = ax.left_ax
if hasattr(ax, "right_ax"):
other_ax = ax.right_ax
if other_ax is not None:
rlines, rlabels = _replot_ax(other_ax, freq, kwargs)
lines.extend(rlines)
labels.extend(rlabels)
if legend is not None and kwargs.get("legend", True) and len(lines) > 0:
title = legend.get_title().get_text()
if title == "None":
title = None
ax.legend(lines, labels, loc="best", title=title)
def _replot_ax(ax, freq, kwargs):
data = getattr(ax, "_plot_data", None)
# clear current axes and data
ax._plot_data = []
ax.clear()
_decorate_axes(ax, freq, kwargs)
lines = []
labels = []
if data is not None:
for series, plotf, kwds in data:
series = series.copy()
idx = series.index.asfreq(freq, how="S")
series.index = idx
ax._plot_data.append((series, plotf, kwds))
# for tsplot
if isinstance(plotf, str):
from pandas.plotting._matplotlib import PLOT_CLASSES
plotf = PLOT_CLASSES[plotf]._plot
lines.append(plotf(ax, series.index._mpl_repr(), series.values, **kwds)[0])
labels.append(pprint_thing(series.name))
return lines, labels
def _decorate_axes(ax, freq, kwargs):
"""Initialize axes for time-series plotting"""
if not hasattr(ax, "_plot_data"):
ax._plot_data = []
ax.freq = freq
xaxis = ax.get_xaxis()
xaxis.freq = freq
if not hasattr(ax, "legendlabels"):
ax.legendlabels = [kwargs.get("label", None)]
else:
ax.legendlabels.append(kwargs.get("label", None))
ax.view_interval = None
ax.date_axis_info = None
def _get_ax_freq(ax):
"""
Get the freq attribute of the ax object if set.
Also checks shared axes (eg when using secondary yaxis, sharex=True
or twinx)
"""
ax_freq = getattr(ax, "freq", None)
if ax_freq is None:
# check for left/right ax in case of secondary yaxis
if hasattr(ax, "left_ax"):
ax_freq = getattr(ax.left_ax, "freq", None)
elif hasattr(ax, "right_ax"):
ax_freq = getattr(ax.right_ax, "freq", None)
if ax_freq is None:
# check if a shared ax (sharex/twinx) has already freq set
shared_axes = ax.get_shared_x_axes().get_siblings(ax)
if len(shared_axes) > 1:
for shared_ax in shared_axes:
ax_freq = getattr(shared_ax, "freq", None)
if ax_freq is not None:
break
return ax_freq
def _get_period_alias(freq) -> Optional[str]:
freqstr = to_offset(freq).rule_code
freq = get_period_alias(freqstr)
return freq
def _get_freq(ax, series: "Series"):
# get frequency from data
freq = getattr(series.index, "freq", None)
if freq is None:
freq = getattr(series.index, "inferred_freq", None)
freq = to_offset(freq)
ax_freq = _get_ax_freq(ax)
# use axes freq if no data freq
if freq is None:
freq = ax_freq
# get the period frequency
freq = _get_period_alias(freq)
return freq, ax_freq
def _use_dynamic_x(ax, data: "FrameOrSeriesUnion") -> bool:
freq = _get_index_freq(data.index)
ax_freq = _get_ax_freq(ax)
if freq is None: # convert irregular if axes has freq info
freq = ax_freq
else: # do not use tsplot if irregular was plotted first
if (ax_freq is None) and (len(ax.get_lines()) > 0):
return False
if freq is None:
return False
freq = _get_period_alias(freq)
if freq is None:
return False
# FIXME: hack this for 0.10.1, creating more technical debt...sigh
if isinstance(data.index, ABCDatetimeIndex):
base = to_offset(freq)._period_dtype_code
x = data.index
if base <= FreqGroup.FR_DAY:
return x[:1].is_normalized
return Period(x[0], freq).to_timestamp().tz_localize(x.tz) == x[0]
return True
def _get_index_freq(index: "Index") -> Optional[BaseOffset]:
freq = getattr(index, "freq", None)
if freq is None:
freq = getattr(index, "inferred_freq", None)
if freq == "B":
weekdays = np.unique(index.dayofweek) # type: ignore
if (5 in weekdays) or (6 in weekdays):
freq = None
freq = to_offset(freq)
return freq
def _maybe_convert_index(ax, data):
# tsplot converts automatically, but don't want to convert index
# over and over for DataFrames
if isinstance(data.index, (ABCDatetimeIndex, ABCPeriodIndex)):
freq = data.index.freq
if freq is None:
# We only get here for DatetimeIndex
freq = data.index.inferred_freq
freq = to_offset(freq)
if freq is None:
freq = _get_ax_freq(ax)
if freq is None:
raise ValueError("Could not get frequency alias for plotting")
freq = _get_period_alias(freq)
if isinstance(data.index, ABCDatetimeIndex):
data = data.tz_localize(None).to_period(freq=freq)
elif isinstance(data.index, ABCPeriodIndex):
data.index = data.index.asfreq(freq=freq)
return data
# Patch methods for subplot. Only format_dateaxis is currently used.
# Do we need the rest for convenience?
def _format_coord(freq, t, y):
time_period = Period(ordinal=int(t), freq=freq)
return f"t = {time_period} y = {y:8f}"
def format_dateaxis(subplot, freq, index):
"""
Pretty-formats the date axis (x-axis).
Major and minor ticks are automatically set for the frequency of the
current underlying series. As the dynamic mode is activated by
default, changing the limits of the x axis will intelligently change
the positions of the ticks.
"""
from matplotlib import pylab
# handle index specific formatting
# Note: DatetimeIndex does not use this
# interface. DatetimeIndex uses matplotlib.date directly
if isinstance(index, ABCPeriodIndex):
majlocator = TimeSeries_DateLocator(
freq, dynamic_mode=True, minor_locator=False, plot_obj=subplot
)
minlocator = TimeSeries_DateLocator(
freq, dynamic_mode=True, minor_locator=True, plot_obj=subplot
)
subplot.xaxis.set_major_locator(majlocator)
subplot.xaxis.set_minor_locator(minlocator)
majformatter = TimeSeries_DateFormatter(
freq, dynamic_mode=True, minor_locator=False, plot_obj=subplot
)
minformatter = TimeSeries_DateFormatter(
freq, dynamic_mode=True, minor_locator=True, plot_obj=subplot
)
subplot.xaxis.set_major_formatter(majformatter)
subplot.xaxis.set_minor_formatter(minformatter)
# x and y coord info
subplot.format_coord = functools.partial(_format_coord, freq)
elif isinstance(index, ABCTimedeltaIndex):
subplot.xaxis.set_major_formatter(TimeSeries_TimedeltaFormatter())
else:
raise TypeError("index type not supported")
pylab.draw_if_interactive()