Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍
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1264 lines
44 KiB
1264 lines
44 KiB
4 years ago
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#!/usr/bin/env python3
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"""
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C declarations, CPP macros, and C functions for f2py2e.
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Only required declarations/macros/functions will be used.
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Copyright 1999,2000 Pearu Peterson all rights reserved,
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Pearu Peterson <pearu@ioc.ee>
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Permission to use, modify, and distribute this software is given under the
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terms of the NumPy License.
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NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK.
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$Date: 2005/05/06 11:42:34 $
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Pearu Peterson
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"""
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import sys
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import copy
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from . import __version__
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f2py_version = __version__.version
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errmess = sys.stderr.write
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##################### Definitions ##################
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outneeds = {'includes0': [], 'includes': [], 'typedefs': [], 'typedefs_generated': [],
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'userincludes': [],
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'cppmacros': [], 'cfuncs': [], 'callbacks': [], 'f90modhooks': [],
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'commonhooks': []}
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needs = {}
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includes0 = {'includes0': '/*need_includes0*/'}
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includes = {'includes': '/*need_includes*/'}
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userincludes = {'userincludes': '/*need_userincludes*/'}
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typedefs = {'typedefs': '/*need_typedefs*/'}
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typedefs_generated = {'typedefs_generated': '/*need_typedefs_generated*/'}
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cppmacros = {'cppmacros': '/*need_cppmacros*/'}
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cfuncs = {'cfuncs': '/*need_cfuncs*/'}
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callbacks = {'callbacks': '/*need_callbacks*/'}
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f90modhooks = {'f90modhooks': '/*need_f90modhooks*/',
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'initf90modhooksstatic': '/*initf90modhooksstatic*/',
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'initf90modhooksdynamic': '/*initf90modhooksdynamic*/',
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}
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commonhooks = {'commonhooks': '/*need_commonhooks*/',
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'initcommonhooks': '/*need_initcommonhooks*/',
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}
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############ Includes ###################
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includes0['math.h'] = '#include <math.h>'
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includes0['string.h'] = '#include <string.h>'
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includes0['setjmp.h'] = '#include <setjmp.h>'
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includes['Python.h'] = '#include "Python.h"'
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needs['arrayobject.h'] = ['Python.h']
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includes['arrayobject.h'] = '''#define PY_ARRAY_UNIQUE_SYMBOL PyArray_API
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#include "arrayobject.h"'''
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includes['arrayobject.h'] = '#include "fortranobject.h"'
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includes['stdarg.h'] = '#include <stdarg.h>'
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############# Type definitions ###############
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typedefs['unsigned_char'] = 'typedef unsigned char unsigned_char;'
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typedefs['unsigned_short'] = 'typedef unsigned short unsigned_short;'
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typedefs['unsigned_long'] = 'typedef unsigned long unsigned_long;'
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typedefs['signed_char'] = 'typedef signed char signed_char;'
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typedefs['long_long'] = """\
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#ifdef _WIN32
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typedef __int64 long_long;
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#else
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typedef long long long_long;
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typedef unsigned long long unsigned_long_long;
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#endif
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"""
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typedefs['unsigned_long_long'] = """\
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#ifdef _WIN32
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typedef __uint64 long_long;
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#else
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typedef unsigned long long unsigned_long_long;
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#endif
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"""
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typedefs['long_double'] = """\
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#ifndef _LONG_DOUBLE
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typedef long double long_double;
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#endif
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"""
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typedefs[
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'complex_long_double'] = 'typedef struct {long double r,i;} complex_long_double;'
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typedefs['complex_float'] = 'typedef struct {float r,i;} complex_float;'
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typedefs['complex_double'] = 'typedef struct {double r,i;} complex_double;'
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typedefs['string'] = """typedef char * string;"""
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############### CPP macros ####################
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cppmacros['CFUNCSMESS'] = """\
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#ifdef DEBUGCFUNCS
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#define CFUNCSMESS(mess) fprintf(stderr,\"debug-capi:\"mess);
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#define CFUNCSMESSPY(mess,obj) CFUNCSMESS(mess) \\
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PyObject_Print((PyObject *)obj,stderr,Py_PRINT_RAW);\\
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fprintf(stderr,\"\\n\");
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#else
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#define CFUNCSMESS(mess)
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#define CFUNCSMESSPY(mess,obj)
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#endif
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"""
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cppmacros['F_FUNC'] = """\
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#if defined(PREPEND_FORTRAN)
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#if defined(NO_APPEND_FORTRAN)
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#if defined(UPPERCASE_FORTRAN)
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#define F_FUNC(f,F) _##F
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#else
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#define F_FUNC(f,F) _##f
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#endif
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#else
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#if defined(UPPERCASE_FORTRAN)
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#define F_FUNC(f,F) _##F##_
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#else
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#define F_FUNC(f,F) _##f##_
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#endif
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#endif
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#else
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#if defined(NO_APPEND_FORTRAN)
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#if defined(UPPERCASE_FORTRAN)
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#define F_FUNC(f,F) F
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#else
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#define F_FUNC(f,F) f
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#endif
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#else
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#if defined(UPPERCASE_FORTRAN)
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#define F_FUNC(f,F) F##_
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#else
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#define F_FUNC(f,F) f##_
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#endif
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#endif
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#endif
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#if defined(UNDERSCORE_G77)
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#define F_FUNC_US(f,F) F_FUNC(f##_,F##_)
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#else
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#define F_FUNC_US(f,F) F_FUNC(f,F)
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#endif
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"""
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cppmacros['F_WRAPPEDFUNC'] = """\
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#if defined(PREPEND_FORTRAN)
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#if defined(NO_APPEND_FORTRAN)
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#if defined(UPPERCASE_FORTRAN)
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#define F_WRAPPEDFUNC(f,F) _F2PYWRAP##F
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#else
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#define F_WRAPPEDFUNC(f,F) _f2pywrap##f
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#endif
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#else
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#if defined(UPPERCASE_FORTRAN)
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#define F_WRAPPEDFUNC(f,F) _F2PYWRAP##F##_
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#else
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#define F_WRAPPEDFUNC(f,F) _f2pywrap##f##_
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#endif
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#endif
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#else
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#if defined(NO_APPEND_FORTRAN)
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#if defined(UPPERCASE_FORTRAN)
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#define F_WRAPPEDFUNC(f,F) F2PYWRAP##F
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#else
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#define F_WRAPPEDFUNC(f,F) f2pywrap##f
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#endif
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#else
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#if defined(UPPERCASE_FORTRAN)
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#define F_WRAPPEDFUNC(f,F) F2PYWRAP##F##_
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#else
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#define F_WRAPPEDFUNC(f,F) f2pywrap##f##_
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#endif
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#endif
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#endif
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#if defined(UNDERSCORE_G77)
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#define F_WRAPPEDFUNC_US(f,F) F_WRAPPEDFUNC(f##_,F##_)
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#else
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#define F_WRAPPEDFUNC_US(f,F) F_WRAPPEDFUNC(f,F)
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#endif
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"""
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cppmacros['F_MODFUNC'] = """\
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#if defined(F90MOD2CCONV1) /*E.g. Compaq Fortran */
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#if defined(NO_APPEND_FORTRAN)
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#define F_MODFUNCNAME(m,f) $ ## m ## $ ## f
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#else
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#define F_MODFUNCNAME(m,f) $ ## m ## $ ## f ## _
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#endif
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#endif
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#if defined(F90MOD2CCONV2) /*E.g. IBM XL Fortran, not tested though */
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#if defined(NO_APPEND_FORTRAN)
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#define F_MODFUNCNAME(m,f) __ ## m ## _MOD_ ## f
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#else
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#define F_MODFUNCNAME(m,f) __ ## m ## _MOD_ ## f ## _
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#endif
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#endif
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#if defined(F90MOD2CCONV3) /*E.g. MIPSPro Compilers */
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#if defined(NO_APPEND_FORTRAN)
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#define F_MODFUNCNAME(m,f) f ## .in. ## m
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#else
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#define F_MODFUNCNAME(m,f) f ## .in. ## m ## _
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#endif
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#endif
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/*
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#if defined(UPPERCASE_FORTRAN)
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#define F_MODFUNC(m,M,f,F) F_MODFUNCNAME(M,F)
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#else
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#define F_MODFUNC(m,M,f,F) F_MODFUNCNAME(m,f)
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#endif
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*/
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#define F_MODFUNC(m,f) (*(f2pymodstruct##m##.##f))
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"""
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cppmacros['SWAPUNSAFE'] = """\
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#define SWAP(a,b) (size_t)(a) = ((size_t)(a) ^ (size_t)(b));\\
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(size_t)(b) = ((size_t)(a) ^ (size_t)(b));\\
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(size_t)(a) = ((size_t)(a) ^ (size_t)(b))
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"""
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cppmacros['SWAP'] = """\
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#define SWAP(a,b,t) {\\
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t *c;\\
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c = a;\\
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a = b;\\
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b = c;}
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"""
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# cppmacros['ISCONTIGUOUS']='#define ISCONTIGUOUS(m) (PyArray_FLAGS(m) &
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# NPY_ARRAY_C_CONTIGUOUS)'
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cppmacros['PRINTPYOBJERR'] = """\
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#define PRINTPYOBJERR(obj)\\
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fprintf(stderr,\"#modulename#.error is related to \");\\
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PyObject_Print((PyObject *)obj,stderr,Py_PRINT_RAW);\\
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fprintf(stderr,\"\\n\");
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"""
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cppmacros['MINMAX'] = """\
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#ifndef max
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#define max(a,b) ((a > b) ? (a) : (b))
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#endif
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#ifndef min
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#define min(a,b) ((a < b) ? (a) : (b))
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#endif
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#ifndef MAX
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#define MAX(a,b) ((a > b) ? (a) : (b))
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#endif
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#ifndef MIN
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#define MIN(a,b) ((a < b) ? (a) : (b))
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#endif
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"""
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needs['len..'] = ['f2py_size']
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cppmacros['len..'] = """\
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#define rank(var) var ## _Rank
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#define shape(var,dim) var ## _Dims[dim]
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#define old_rank(var) (PyArray_NDIM((PyArrayObject *)(capi_ ## var ## _tmp)))
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#define old_shape(var,dim) PyArray_DIM(((PyArrayObject *)(capi_ ## var ## _tmp)),dim)
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#define fshape(var,dim) shape(var,rank(var)-dim-1)
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#define len(var) shape(var,0)
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#define flen(var) fshape(var,0)
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#define old_size(var) PyArray_SIZE((PyArrayObject *)(capi_ ## var ## _tmp))
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/* #define index(i) capi_i ## i */
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#define slen(var) capi_ ## var ## _len
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#define size(var, ...) f2py_size((PyArrayObject *)(capi_ ## var ## _tmp), ## __VA_ARGS__, -1)
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"""
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needs['f2py_size'] = ['stdarg.h']
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cfuncs['f2py_size'] = """\
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static int f2py_size(PyArrayObject* var, ...)
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{
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npy_int sz = 0;
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npy_int dim;
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npy_int rank;
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va_list argp;
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va_start(argp, var);
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dim = va_arg(argp, npy_int);
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if (dim==-1)
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{
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sz = PyArray_SIZE(var);
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}
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else
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{
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rank = PyArray_NDIM(var);
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if (dim>=1 && dim<=rank)
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sz = PyArray_DIM(var, dim-1);
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else
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fprintf(stderr, \"f2py_size: 2nd argument value=%d fails to satisfy 1<=value<=%d. Result will be 0.\\n\", dim, rank);
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}
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va_end(argp);
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return sz;
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}
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"""
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cppmacros[
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'pyobj_from_char1'] = '#define pyobj_from_char1(v) (PyInt_FromLong(v))'
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cppmacros[
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'pyobj_from_short1'] = '#define pyobj_from_short1(v) (PyInt_FromLong(v))'
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needs['pyobj_from_int1'] = ['signed_char']
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cppmacros['pyobj_from_int1'] = '#define pyobj_from_int1(v) (PyInt_FromLong(v))'
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cppmacros[
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'pyobj_from_long1'] = '#define pyobj_from_long1(v) (PyLong_FromLong(v))'
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needs['pyobj_from_long_long1'] = ['long_long']
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cppmacros['pyobj_from_long_long1'] = """\
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#ifdef HAVE_LONG_LONG
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#define pyobj_from_long_long1(v) (PyLong_FromLongLong(v))
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#else
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#warning HAVE_LONG_LONG is not available. Redefining pyobj_from_long_long.
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#define pyobj_from_long_long1(v) (PyLong_FromLong(v))
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#endif
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||
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"""
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||
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needs['pyobj_from_long_double1'] = ['long_double']
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cppmacros[
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||
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'pyobj_from_long_double1'] = '#define pyobj_from_long_double1(v) (PyFloat_FromDouble(v))'
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cppmacros[
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||
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'pyobj_from_double1'] = '#define pyobj_from_double1(v) (PyFloat_FromDouble(v))'
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||
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cppmacros[
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||
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'pyobj_from_float1'] = '#define pyobj_from_float1(v) (PyFloat_FromDouble(v))'
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||
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needs['pyobj_from_complex_long_double1'] = ['complex_long_double']
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cppmacros[
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'pyobj_from_complex_long_double1'] = '#define pyobj_from_complex_long_double1(v) (PyComplex_FromDoubles(v.r,v.i))'
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needs['pyobj_from_complex_double1'] = ['complex_double']
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cppmacros[
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'pyobj_from_complex_double1'] = '#define pyobj_from_complex_double1(v) (PyComplex_FromDoubles(v.r,v.i))'
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||
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needs['pyobj_from_complex_float1'] = ['complex_float']
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cppmacros[
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||
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'pyobj_from_complex_float1'] = '#define pyobj_from_complex_float1(v) (PyComplex_FromDoubles(v.r,v.i))'
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||
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needs['pyobj_from_string1'] = ['string']
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cppmacros[
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'pyobj_from_string1'] = '#define pyobj_from_string1(v) (PyString_FromString((char *)v))'
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||
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needs['pyobj_from_string1size'] = ['string']
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||
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cppmacros[
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||
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'pyobj_from_string1size'] = '#define pyobj_from_string1size(v,len) (PyUString_FromStringAndSize((char *)v, len))'
|
||
|
|
needs['TRYPYARRAYTEMPLATE'] = ['PRINTPYOBJERR']
|
||
|
|
cppmacros['TRYPYARRAYTEMPLATE'] = """\
|
||
|
|
/* New SciPy */
|
||
|
|
#define TRYPYARRAYTEMPLATECHAR case NPY_STRING: *(char *)(PyArray_DATA(arr))=*v; break;
|
||
|
|
#define TRYPYARRAYTEMPLATELONG case NPY_LONG: *(long *)(PyArray_DATA(arr))=*v; break;
|
||
|
|
#define TRYPYARRAYTEMPLATEOBJECT case NPY_OBJECT: PyArray_SETITEM(arr,PyArray_DATA(arr),pyobj_from_ ## ctype ## 1(*v)); break;
|
||
|
|
|
||
|
|
#define TRYPYARRAYTEMPLATE(ctype,typecode) \\
|
||
|
|
PyArrayObject *arr = NULL;\\
|
||
|
|
if (!obj) return -2;\\
|
||
|
|
if (!PyArray_Check(obj)) return -1;\\
|
||
|
|
if (!(arr=(PyArrayObject *)obj)) {fprintf(stderr,\"TRYPYARRAYTEMPLATE:\");PRINTPYOBJERR(obj);return 0;}\\
|
||
|
|
if (PyArray_DESCR(arr)->type==typecode) {*(ctype *)(PyArray_DATA(arr))=*v; return 1;}\\
|
||
|
|
switch (PyArray_TYPE(arr)) {\\
|
||
|
|
case NPY_DOUBLE: *(double *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_INT: *(int *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_LONG: *(long *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_FLOAT: *(float *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_CDOUBLE: *(double *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_CFLOAT: *(float *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_BOOL: *(npy_bool *)(PyArray_DATA(arr))=(*v!=0); break;\\
|
||
|
|
case NPY_UBYTE: *(unsigned char *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_BYTE: *(signed char *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_SHORT: *(short *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_USHORT: *(npy_ushort *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_UINT: *(npy_uint *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_ULONG: *(npy_ulong *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_LONGLONG: *(npy_longlong *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_ULONGLONG: *(npy_ulonglong *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_LONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_CLONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=*v; break;\\
|
||
|
|
case NPY_OBJECT: PyArray_SETITEM(arr, PyArray_DATA(arr), pyobj_from_ ## ctype ## 1(*v)); break;\\
|
||
|
|
default: return -2;\\
|
||
|
|
};\\
|
||
|
|
return 1
|
||
|
|
"""
|
||
|
|
|
||
|
|
needs['TRYCOMPLEXPYARRAYTEMPLATE'] = ['PRINTPYOBJERR']
|
||
|
|
cppmacros['TRYCOMPLEXPYARRAYTEMPLATE'] = """\
|
||
|
|
#define TRYCOMPLEXPYARRAYTEMPLATEOBJECT case NPY_OBJECT: PyArray_SETITEM(arr, PyArray_DATA(arr), pyobj_from_complex_ ## ctype ## 1((*v))); break;
|
||
|
|
#define TRYCOMPLEXPYARRAYTEMPLATE(ctype,typecode)\\
|
||
|
|
PyArrayObject *arr = NULL;\\
|
||
|
|
if (!obj) return -2;\\
|
||
|
|
if (!PyArray_Check(obj)) return -1;\\
|
||
|
|
if (!(arr=(PyArrayObject *)obj)) {fprintf(stderr,\"TRYCOMPLEXPYARRAYTEMPLATE:\");PRINTPYOBJERR(obj);return 0;}\\
|
||
|
|
if (PyArray_DESCR(arr)->type==typecode) {\\
|
||
|
|
*(ctype *)(PyArray_DATA(arr))=(*v).r;\\
|
||
|
|
*(ctype *)(PyArray_DATA(arr)+sizeof(ctype))=(*v).i;\\
|
||
|
|
return 1;\\
|
||
|
|
}\\
|
||
|
|
switch (PyArray_TYPE(arr)) {\\
|
||
|
|
case NPY_CDOUBLE: *(double *)(PyArray_DATA(arr))=(*v).r;*(double *)(PyArray_DATA(arr)+sizeof(double))=(*v).i;break;\\
|
||
|
|
case NPY_CFLOAT: *(float *)(PyArray_DATA(arr))=(*v).r;*(float *)(PyArray_DATA(arr)+sizeof(float))=(*v).i;break;\\
|
||
|
|
case NPY_DOUBLE: *(double *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_LONG: *(long *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_FLOAT: *(float *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_INT: *(int *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_SHORT: *(short *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_UBYTE: *(unsigned char *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_BYTE: *(signed char *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_BOOL: *(npy_bool *)(PyArray_DATA(arr))=((*v).r!=0 && (*v).i!=0); break;\\
|
||
|
|
case NPY_USHORT: *(npy_ushort *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_UINT: *(npy_uint *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_ULONG: *(npy_ulong *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_LONGLONG: *(npy_longlong *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_ULONGLONG: *(npy_ulonglong *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_LONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=(*v).r; break;\\
|
||
|
|
case NPY_CLONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=(*v).r;*(npy_longdouble *)(PyArray_DATA(arr)+sizeof(npy_longdouble))=(*v).i;break;\\
|
||
|
|
case NPY_OBJECT: PyArray_SETITEM(arr, PyArray_DATA(arr), pyobj_from_complex_ ## ctype ## 1((*v))); break;\\
|
||
|
|
default: return -2;\\
|
||
|
|
};\\
|
||
|
|
return -1;
|
||
|
|
"""
|
||
|
|
# cppmacros['NUMFROMARROBJ']="""\
|
||
|
|
# define NUMFROMARROBJ(typenum,ctype) \\
|
||
|
|
# if (PyArray_Check(obj)) arr = (PyArrayObject *)obj;\\
|
||
|
|
# else arr = (PyArrayObject *)PyArray_ContiguousFromObject(obj,typenum,0,0);\\
|
||
|
|
# if (arr) {\\
|
||
|
|
# if (PyArray_TYPE(arr)==NPY_OBJECT) {\\
|
||
|
|
# if (!ctype ## _from_pyobj(v,(PyArray_DESCR(arr)->getitem)(PyArray_DATA(arr)),\"\"))\\
|
||
|
|
# goto capi_fail;\\
|
||
|
|
# } else {\\
|
||
|
|
# (PyArray_DESCR(arr)->cast[typenum])(PyArray_DATA(arr),1,(char*)v,1,1);\\
|
||
|
|
# }\\
|
||
|
|
# if ((PyObject *)arr != obj) { Py_DECREF(arr); }\\
|
||
|
|
# return 1;\\
|
||
|
|
# }
|
||
|
|
# """
|
||
|
|
# XXX: Note that CNUMFROMARROBJ is identical with NUMFROMARROBJ
|
||
|
|
# cppmacros['CNUMFROMARROBJ']="""\
|
||
|
|
# define CNUMFROMARROBJ(typenum,ctype) \\
|
||
|
|
# if (PyArray_Check(obj)) arr = (PyArrayObject *)obj;\\
|
||
|
|
# else arr = (PyArrayObject *)PyArray_ContiguousFromObject(obj,typenum,0,0);\\
|
||
|
|
# if (arr) {\\
|
||
|
|
# if (PyArray_TYPE(arr)==NPY_OBJECT) {\\
|
||
|
|
# if (!ctype ## _from_pyobj(v,(PyArray_DESCR(arr)->getitem)(PyArray_DATA(arr)),\"\"))\\
|
||
|
|
# goto capi_fail;\\
|
||
|
|
# } else {\\
|
||
|
|
# (PyArray_DESCR(arr)->cast[typenum])((void *)(PyArray_DATA(arr)),1,(void *)(v),1,1);\\
|
||
|
|
# }\\
|
||
|
|
# if ((PyObject *)arr != obj) { Py_DECREF(arr); }\\
|
||
|
|
# return 1;\\
|
||
|
|
# }
|
||
|
|
# """
|
||
|
|
|
||
|
|
|
||
|
|
needs['GETSTRFROMPYTUPLE'] = ['STRINGCOPYN', 'PRINTPYOBJERR']
|
||
|
|
cppmacros['GETSTRFROMPYTUPLE'] = """\
|
||
|
|
#define GETSTRFROMPYTUPLE(tuple,index,str,len) {\\
|
||
|
|
PyObject *rv_cb_str = PyTuple_GetItem((tuple),(index));\\
|
||
|
|
if (rv_cb_str == NULL)\\
|
||
|
|
goto capi_fail;\\
|
||
|
|
if (PyString_Check(rv_cb_str)) {\\
|
||
|
|
str[len-1]='\\0';\\
|
||
|
|
STRINGCOPYN((str),PyString_AS_STRING((PyStringObject*)rv_cb_str),(len));\\
|
||
|
|
} else {\\
|
||
|
|
PRINTPYOBJERR(rv_cb_str);\\
|
||
|
|
PyErr_SetString(#modulename#_error,\"string object expected\");\\
|
||
|
|
goto capi_fail;\\
|
||
|
|
}\\
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
cppmacros['GETSCALARFROMPYTUPLE'] = """\
|
||
|
|
#define GETSCALARFROMPYTUPLE(tuple,index,var,ctype,mess) {\\
|
||
|
|
if ((capi_tmp = PyTuple_GetItem((tuple),(index)))==NULL) goto capi_fail;\\
|
||
|
|
if (!(ctype ## _from_pyobj((var),capi_tmp,mess)))\\
|
||
|
|
goto capi_fail;\\
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
|
||
|
|
cppmacros['FAILNULL'] = """\\
|
||
|
|
#define FAILNULL(p) do { \\
|
||
|
|
if ((p) == NULL) { \\
|
||
|
|
PyErr_SetString(PyExc_MemoryError, "NULL pointer found"); \\
|
||
|
|
goto capi_fail; \\
|
||
|
|
} \\
|
||
|
|
} while (0)
|
||
|
|
"""
|
||
|
|
needs['MEMCOPY'] = ['string.h', 'FAILNULL']
|
||
|
|
cppmacros['MEMCOPY'] = """\
|
||
|
|
#define MEMCOPY(to,from,n)\\
|
||
|
|
do { FAILNULL(to); FAILNULL(from); (void)memcpy(to,from,n); } while (0)
|
||
|
|
"""
|
||
|
|
cppmacros['STRINGMALLOC'] = """\
|
||
|
|
#define STRINGMALLOC(str,len)\\
|
||
|
|
if ((str = (string)malloc(sizeof(char)*(len+1))) == NULL) {\\
|
||
|
|
PyErr_SetString(PyExc_MemoryError, \"out of memory\");\\
|
||
|
|
goto capi_fail;\\
|
||
|
|
} else {\\
|
||
|
|
(str)[len] = '\\0';\\
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
cppmacros['STRINGFREE'] = """\
|
||
|
|
#define STRINGFREE(str) do {if (!(str == NULL)) free(str);} while (0)
|
||
|
|
"""
|
||
|
|
needs['STRINGCOPYN'] = ['string.h', 'FAILNULL']
|
||
|
|
cppmacros['STRINGCOPYN'] = """\
|
||
|
|
#define STRINGCOPYN(to,from,buf_size) \\
|
||
|
|
do { \\
|
||
|
|
int _m = (buf_size); \\
|
||
|
|
char *_to = (to); \\
|
||
|
|
char *_from = (from); \\
|
||
|
|
FAILNULL(_to); FAILNULL(_from); \\
|
||
|
|
(void)strncpy(_to, _from, sizeof(char)*_m); \\
|
||
|
|
_to[_m-1] = '\\0'; \\
|
||
|
|
/* Padding with spaces instead of nulls */ \\
|
||
|
|
for (_m -= 2; _m >= 0 && _to[_m] == '\\0'; _m--) { \\
|
||
|
|
_to[_m] = ' '; \\
|
||
|
|
} \\
|
||
|
|
} while (0)
|
||
|
|
"""
|
||
|
|
needs['STRINGCOPY'] = ['string.h', 'FAILNULL']
|
||
|
|
cppmacros['STRINGCOPY'] = """\
|
||
|
|
#define STRINGCOPY(to,from)\\
|
||
|
|
do { FAILNULL(to); FAILNULL(from); (void)strcpy(to,from); } while (0)
|
||
|
|
"""
|
||
|
|
cppmacros['CHECKGENERIC'] = """\
|
||
|
|
#define CHECKGENERIC(check,tcheck,name) \\
|
||
|
|
if (!(check)) {\\
|
||
|
|
PyErr_SetString(#modulename#_error,\"(\"tcheck\") failed for \"name);\\
|
||
|
|
/*goto capi_fail;*/\\
|
||
|
|
} else """
|
||
|
|
cppmacros['CHECKARRAY'] = """\
|
||
|
|
#define CHECKARRAY(check,tcheck,name) \\
|
||
|
|
if (!(check)) {\\
|
||
|
|
PyErr_SetString(#modulename#_error,\"(\"tcheck\") failed for \"name);\\
|
||
|
|
/*goto capi_fail;*/\\
|
||
|
|
} else """
|
||
|
|
cppmacros['CHECKSTRING'] = """\
|
||
|
|
#define CHECKSTRING(check,tcheck,name,show,var)\\
|
||
|
|
if (!(check)) {\\
|
||
|
|
char errstring[256];\\
|
||
|
|
sprintf(errstring, \"%s: \"show, \"(\"tcheck\") failed for \"name, slen(var), var);\\
|
||
|
|
PyErr_SetString(#modulename#_error, errstring);\\
|
||
|
|
/*goto capi_fail;*/\\
|
||
|
|
} else """
|
||
|
|
cppmacros['CHECKSCALAR'] = """\
|
||
|
|
#define CHECKSCALAR(check,tcheck,name,show,var)\\
|
||
|
|
if (!(check)) {\\
|
||
|
|
char errstring[256];\\
|
||
|
|
sprintf(errstring, \"%s: \"show, \"(\"tcheck\") failed for \"name, var);\\
|
||
|
|
PyErr_SetString(#modulename#_error,errstring);\\
|
||
|
|
/*goto capi_fail;*/\\
|
||
|
|
} else """
|
||
|
|
# cppmacros['CHECKDIMS']="""\
|
||
|
|
# define CHECKDIMS(dims,rank) \\
|
||
|
|
# for (int i=0;i<(rank);i++)\\
|
||
|
|
# if (dims[i]<0) {\\
|
||
|
|
# fprintf(stderr,\"Unspecified array argument requires a complete dimension specification.\\n\");\\
|
||
|
|
# goto capi_fail;\\
|
||
|
|
# }
|
||
|
|
# """
|
||
|
|
cppmacros[
|
||
|
|
'ARRSIZE'] = '#define ARRSIZE(dims,rank) (_PyArray_multiply_list(dims,rank))'
|
||
|
|
cppmacros['OLDPYNUM'] = """\
|
||
|
|
#ifdef OLDPYNUM
|
||
|
|
#error You need to install NumPy version 0.13 or higher. See https://scipy.org/install.html
|
||
|
|
#endif
|
||
|
|
"""
|
||
|
|
################# C functions ###############
|
||
|
|
|
||
|
|
cfuncs['calcarrindex'] = """\
|
||
|
|
static int calcarrindex(int *i,PyArrayObject *arr) {
|
||
|
|
int k,ii = i[0];
|
||
|
|
for (k=1; k < PyArray_NDIM(arr); k++)
|
||
|
|
ii += (ii*(PyArray_DIM(arr,k) - 1)+i[k]); /* assuming contiguous arr */
|
||
|
|
return ii;
|
||
|
|
}"""
|
||
|
|
cfuncs['calcarrindextr'] = """\
|
||
|
|
static int calcarrindextr(int *i,PyArrayObject *arr) {
|
||
|
|
int k,ii = i[PyArray_NDIM(arr)-1];
|
||
|
|
for (k=1; k < PyArray_NDIM(arr); k++)
|
||
|
|
ii += (ii*(PyArray_DIM(arr,PyArray_NDIM(arr)-k-1) - 1)+i[PyArray_NDIM(arr)-k-1]); /* assuming contiguous arr */
|
||
|
|
return ii;
|
||
|
|
}"""
|
||
|
|
cfuncs['forcomb'] = """\
|
||
|
|
static struct { int nd;npy_intp *d;int *i,*i_tr,tr; } forcombcache;
|
||
|
|
static int initforcomb(npy_intp *dims,int nd,int tr) {
|
||
|
|
int k;
|
||
|
|
if (dims==NULL) return 0;
|
||
|
|
if (nd<0) return 0;
|
||
|
|
forcombcache.nd = nd;
|
||
|
|
forcombcache.d = dims;
|
||
|
|
forcombcache.tr = tr;
|
||
|
|
if ((forcombcache.i = (int *)malloc(sizeof(int)*nd))==NULL) return 0;
|
||
|
|
if ((forcombcache.i_tr = (int *)malloc(sizeof(int)*nd))==NULL) return 0;
|
||
|
|
for (k=1;k<nd;k++) {
|
||
|
|
forcombcache.i[k] = forcombcache.i_tr[nd-k-1] = 0;
|
||
|
|
}
|
||
|
|
forcombcache.i[0] = forcombcache.i_tr[nd-1] = -1;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
static int *nextforcomb(void) {
|
||
|
|
int j,*i,*i_tr,k;
|
||
|
|
int nd=forcombcache.nd;
|
||
|
|
if ((i=forcombcache.i) == NULL) return NULL;
|
||
|
|
if ((i_tr=forcombcache.i_tr) == NULL) return NULL;
|
||
|
|
if (forcombcache.d == NULL) return NULL;
|
||
|
|
i[0]++;
|
||
|
|
if (i[0]==forcombcache.d[0]) {
|
||
|
|
j=1;
|
||
|
|
while ((j<nd) && (i[j]==forcombcache.d[j]-1)) j++;
|
||
|
|
if (j==nd) {
|
||
|
|
free(i);
|
||
|
|
free(i_tr);
|
||
|
|
return NULL;
|
||
|
|
}
|
||
|
|
for (k=0;k<j;k++) i[k] = i_tr[nd-k-1] = 0;
|
||
|
|
i[j]++;
|
||
|
|
i_tr[nd-j-1]++;
|
||
|
|
} else
|
||
|
|
i_tr[nd-1]++;
|
||
|
|
if (forcombcache.tr) return i_tr;
|
||
|
|
return i;
|
||
|
|
}"""
|
||
|
|
needs['try_pyarr_from_string'] = ['STRINGCOPYN', 'PRINTPYOBJERR', 'string']
|
||
|
|
cfuncs['try_pyarr_from_string'] = """\
|
||
|
|
static int try_pyarr_from_string(PyObject *obj,const string str) {
|
||
|
|
PyArrayObject *arr = NULL;
|
||
|
|
if (PyArray_Check(obj) && (!((arr = (PyArrayObject *)obj) == NULL)))
|
||
|
|
{ STRINGCOPYN(PyArray_DATA(arr),str,PyArray_NBYTES(arr)); }
|
||
|
|
return 1;
|
||
|
|
capi_fail:
|
||
|
|
PRINTPYOBJERR(obj);
|
||
|
|
PyErr_SetString(#modulename#_error,\"try_pyarr_from_string failed\");
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['string_from_pyobj'] = ['string', 'STRINGMALLOC', 'STRINGCOPYN']
|
||
|
|
cfuncs['string_from_pyobj'] = """\
|
||
|
|
static int string_from_pyobj(string *str,int *len,const string inistr,PyObject *obj,const char *errmess) {
|
||
|
|
PyArrayObject *arr = NULL;
|
||
|
|
PyObject *tmp = NULL;
|
||
|
|
#ifdef DEBUGCFUNCS
|
||
|
|
fprintf(stderr,\"string_from_pyobj(str='%s',len=%d,inistr='%s',obj=%p)\\n\",(char*)str,*len,(char *)inistr,obj);
|
||
|
|
#endif
|
||
|
|
if (obj == Py_None) {
|
||
|
|
if (*len == -1)
|
||
|
|
*len = strlen(inistr); /* Will this cause problems? */
|
||
|
|
STRINGMALLOC(*str,*len);
|
||
|
|
STRINGCOPYN(*str,inistr,*len+1);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyArray_Check(obj)) {
|
||
|
|
if ((arr = (PyArrayObject *)obj) == NULL)
|
||
|
|
goto capi_fail;
|
||
|
|
if (!ISCONTIGUOUS(arr)) {
|
||
|
|
PyErr_SetString(PyExc_ValueError,\"array object is non-contiguous.\");
|
||
|
|
goto capi_fail;
|
||
|
|
}
|
||
|
|
if (*len == -1)
|
||
|
|
*len = (PyArray_ITEMSIZE(arr))*PyArray_SIZE(arr);
|
||
|
|
STRINGMALLOC(*str,*len);
|
||
|
|
STRINGCOPYN(*str,PyArray_DATA(arr),*len+1);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyString_Check(obj)) {
|
||
|
|
tmp = obj;
|
||
|
|
Py_INCREF(tmp);
|
||
|
|
}
|
||
|
|
else if (PyUnicode_Check(obj)) {
|
||
|
|
tmp = PyUnicode_AsASCIIString(obj);
|
||
|
|
}
|
||
|
|
else {
|
||
|
|
PyObject *tmp2;
|
||
|
|
tmp2 = PyObject_Str(obj);
|
||
|
|
if (tmp2) {
|
||
|
|
tmp = PyUnicode_AsASCIIString(tmp2);
|
||
|
|
Py_DECREF(tmp2);
|
||
|
|
}
|
||
|
|
else {
|
||
|
|
tmp = NULL;
|
||
|
|
}
|
||
|
|
}
|
||
|
|
if (tmp == NULL) goto capi_fail;
|
||
|
|
if (*len == -1)
|
||
|
|
*len = PyString_GET_SIZE(tmp);
|
||
|
|
STRINGMALLOC(*str,*len);
|
||
|
|
STRINGCOPYN(*str,PyString_AS_STRING(tmp),*len+1);
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
return 1;
|
||
|
|
capi_fail:
|
||
|
|
Py_XDECREF(tmp);
|
||
|
|
{
|
||
|
|
PyObject* err = PyErr_Occurred();
|
||
|
|
if (err==NULL) err = #modulename#_error;
|
||
|
|
PyErr_SetString(err,errmess);
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['char_from_pyobj'] = ['int_from_pyobj']
|
||
|
|
cfuncs['char_from_pyobj'] = """\
|
||
|
|
static int char_from_pyobj(char* v,PyObject *obj,const char *errmess) {
|
||
|
|
int i=0;
|
||
|
|
if (int_from_pyobj(&i,obj,errmess)) {
|
||
|
|
*v = (char)i;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['signed_char_from_pyobj'] = ['int_from_pyobj', 'signed_char']
|
||
|
|
cfuncs['signed_char_from_pyobj'] = """\
|
||
|
|
static int signed_char_from_pyobj(signed_char* v,PyObject *obj,const char *errmess) {
|
||
|
|
int i=0;
|
||
|
|
if (int_from_pyobj(&i,obj,errmess)) {
|
||
|
|
*v = (signed_char)i;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['short_from_pyobj'] = ['int_from_pyobj']
|
||
|
|
cfuncs['short_from_pyobj'] = """\
|
||
|
|
static int short_from_pyobj(short* v,PyObject *obj,const char *errmess) {
|
||
|
|
int i=0;
|
||
|
|
if (int_from_pyobj(&i,obj,errmess)) {
|
||
|
|
*v = (short)i;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
cfuncs['int_from_pyobj'] = """\
|
||
|
|
static int int_from_pyobj(int* v,PyObject *obj,const char *errmess) {
|
||
|
|
PyObject* tmp = NULL;
|
||
|
|
if (PyInt_Check(obj)) {
|
||
|
|
*v = (int)PyInt_AS_LONG(obj);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
tmp = PyNumber_Int(obj);
|
||
|
|
if (tmp) {
|
||
|
|
*v = PyInt_AS_LONG(tmp);
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyComplex_Check(obj))
|
||
|
|
tmp = PyObject_GetAttrString(obj,\"real\");
|
||
|
|
else if (PyString_Check(obj) || PyUnicode_Check(obj))
|
||
|
|
/*pass*/;
|
||
|
|
else if (PySequence_Check(obj))
|
||
|
|
tmp = PySequence_GetItem(obj,0);
|
||
|
|
if (tmp) {
|
||
|
|
PyErr_Clear();
|
||
|
|
if (int_from_pyobj(v,tmp,errmess)) {Py_DECREF(tmp); return 1;}
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
}
|
||
|
|
{
|
||
|
|
PyObject* err = PyErr_Occurred();
|
||
|
|
if (err==NULL) err = #modulename#_error;
|
||
|
|
PyErr_SetString(err,errmess);
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
cfuncs['long_from_pyobj'] = """\
|
||
|
|
static int long_from_pyobj(long* v,PyObject *obj,const char *errmess) {
|
||
|
|
PyObject* tmp = NULL;
|
||
|
|
if (PyInt_Check(obj)) {
|
||
|
|
*v = PyInt_AS_LONG(obj);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
tmp = PyNumber_Int(obj);
|
||
|
|
if (tmp) {
|
||
|
|
*v = PyInt_AS_LONG(tmp);
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyComplex_Check(obj))
|
||
|
|
tmp = PyObject_GetAttrString(obj,\"real\");
|
||
|
|
else if (PyString_Check(obj) || PyUnicode_Check(obj))
|
||
|
|
/*pass*/;
|
||
|
|
else if (PySequence_Check(obj))
|
||
|
|
tmp = PySequence_GetItem(obj,0);
|
||
|
|
if (tmp) {
|
||
|
|
PyErr_Clear();
|
||
|
|
if (long_from_pyobj(v,tmp,errmess)) {Py_DECREF(tmp); return 1;}
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
}
|
||
|
|
{
|
||
|
|
PyObject* err = PyErr_Occurred();
|
||
|
|
if (err==NULL) err = #modulename#_error;
|
||
|
|
PyErr_SetString(err,errmess);
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['long_long_from_pyobj'] = ['long_long']
|
||
|
|
cfuncs['long_long_from_pyobj'] = """\
|
||
|
|
static int long_long_from_pyobj(long_long* v,PyObject *obj,const char *errmess) {
|
||
|
|
PyObject* tmp = NULL;
|
||
|
|
if (PyLong_Check(obj)) {
|
||
|
|
*v = PyLong_AsLongLong(obj);
|
||
|
|
return (!PyErr_Occurred());
|
||
|
|
}
|
||
|
|
if (PyInt_Check(obj)) {
|
||
|
|
*v = (long_long)PyInt_AS_LONG(obj);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
tmp = PyNumber_Long(obj);
|
||
|
|
if (tmp) {
|
||
|
|
*v = PyLong_AsLongLong(tmp);
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
return (!PyErr_Occurred());
|
||
|
|
}
|
||
|
|
if (PyComplex_Check(obj))
|
||
|
|
tmp = PyObject_GetAttrString(obj,\"real\");
|
||
|
|
else if (PyString_Check(obj) || PyUnicode_Check(obj))
|
||
|
|
/*pass*/;
|
||
|
|
else if (PySequence_Check(obj))
|
||
|
|
tmp = PySequence_GetItem(obj,0);
|
||
|
|
if (tmp) {
|
||
|
|
PyErr_Clear();
|
||
|
|
if (long_long_from_pyobj(v,tmp,errmess)) {Py_DECREF(tmp); return 1;}
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
}
|
||
|
|
{
|
||
|
|
PyObject* err = PyErr_Occurred();
|
||
|
|
if (err==NULL) err = #modulename#_error;
|
||
|
|
PyErr_SetString(err,errmess);
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['long_double_from_pyobj'] = ['double_from_pyobj', 'long_double']
|
||
|
|
cfuncs['long_double_from_pyobj'] = """\
|
||
|
|
static int long_double_from_pyobj(long_double* v,PyObject *obj,const char *errmess) {
|
||
|
|
double d=0;
|
||
|
|
if (PyArray_CheckScalar(obj)){
|
||
|
|
if PyArray_IsScalar(obj, LongDouble) {
|
||
|
|
PyArray_ScalarAsCtype(obj, v);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
else if (PyArray_Check(obj) && PyArray_TYPE(obj)==NPY_LONGDOUBLE) {
|
||
|
|
(*v) = *((npy_longdouble *)PyArray_DATA(obj));
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
}
|
||
|
|
if (double_from_pyobj(&d,obj,errmess)) {
|
||
|
|
*v = (long_double)d;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
cfuncs['double_from_pyobj'] = """\
|
||
|
|
static int double_from_pyobj(double* v,PyObject *obj,const char *errmess) {
|
||
|
|
PyObject* tmp = NULL;
|
||
|
|
if (PyFloat_Check(obj)) {
|
||
|
|
#ifdef __sgi
|
||
|
|
*v = PyFloat_AsDouble(obj);
|
||
|
|
#else
|
||
|
|
*v = PyFloat_AS_DOUBLE(obj);
|
||
|
|
#endif
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
tmp = PyNumber_Float(obj);
|
||
|
|
if (tmp) {
|
||
|
|
#ifdef __sgi
|
||
|
|
*v = PyFloat_AsDouble(tmp);
|
||
|
|
#else
|
||
|
|
*v = PyFloat_AS_DOUBLE(tmp);
|
||
|
|
#endif
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyComplex_Check(obj))
|
||
|
|
tmp = PyObject_GetAttrString(obj,\"real\");
|
||
|
|
else if (PyString_Check(obj) || PyUnicode_Check(obj))
|
||
|
|
/*pass*/;
|
||
|
|
else if (PySequence_Check(obj))
|
||
|
|
tmp = PySequence_GetItem(obj,0);
|
||
|
|
if (tmp) {
|
||
|
|
PyErr_Clear();
|
||
|
|
if (double_from_pyobj(v,tmp,errmess)) {Py_DECREF(tmp); return 1;}
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
}
|
||
|
|
{
|
||
|
|
PyObject* err = PyErr_Occurred();
|
||
|
|
if (err==NULL) err = #modulename#_error;
|
||
|
|
PyErr_SetString(err,errmess);
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['float_from_pyobj'] = ['double_from_pyobj']
|
||
|
|
cfuncs['float_from_pyobj'] = """\
|
||
|
|
static int float_from_pyobj(float* v,PyObject *obj,const char *errmess) {
|
||
|
|
double d=0.0;
|
||
|
|
if (double_from_pyobj(&d,obj,errmess)) {
|
||
|
|
*v = (float)d;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['complex_long_double_from_pyobj'] = ['complex_long_double', 'long_double',
|
||
|
|
'complex_double_from_pyobj']
|
||
|
|
cfuncs['complex_long_double_from_pyobj'] = """\
|
||
|
|
static int complex_long_double_from_pyobj(complex_long_double* v,PyObject *obj,const char *errmess) {
|
||
|
|
complex_double cd={0.0,0.0};
|
||
|
|
if (PyArray_CheckScalar(obj)){
|
||
|
|
if PyArray_IsScalar(obj, CLongDouble) {
|
||
|
|
PyArray_ScalarAsCtype(obj, v);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
else if (PyArray_Check(obj) && PyArray_TYPE(obj)==NPY_CLONGDOUBLE) {
|
||
|
|
(*v).r = ((npy_clongdouble *)PyArray_DATA(obj))->real;
|
||
|
|
(*v).i = ((npy_clongdouble *)PyArray_DATA(obj))->imag;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
}
|
||
|
|
if (complex_double_from_pyobj(&cd,obj,errmess)) {
|
||
|
|
(*v).r = (long_double)cd.r;
|
||
|
|
(*v).i = (long_double)cd.i;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['complex_double_from_pyobj'] = ['complex_double']
|
||
|
|
cfuncs['complex_double_from_pyobj'] = """\
|
||
|
|
static int complex_double_from_pyobj(complex_double* v,PyObject *obj,const char *errmess) {
|
||
|
|
Py_complex c;
|
||
|
|
if (PyComplex_Check(obj)) {
|
||
|
|
c=PyComplex_AsCComplex(obj);
|
||
|
|
(*v).r=c.real, (*v).i=c.imag;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyArray_IsScalar(obj, ComplexFloating)) {
|
||
|
|
if (PyArray_IsScalar(obj, CFloat)) {
|
||
|
|
npy_cfloat new;
|
||
|
|
PyArray_ScalarAsCtype(obj, &new);
|
||
|
|
(*v).r = (double)new.real;
|
||
|
|
(*v).i = (double)new.imag;
|
||
|
|
}
|
||
|
|
else if (PyArray_IsScalar(obj, CLongDouble)) {
|
||
|
|
npy_clongdouble new;
|
||
|
|
PyArray_ScalarAsCtype(obj, &new);
|
||
|
|
(*v).r = (double)new.real;
|
||
|
|
(*v).i = (double)new.imag;
|
||
|
|
}
|
||
|
|
else { /* if (PyArray_IsScalar(obj, CDouble)) */
|
||
|
|
PyArray_ScalarAsCtype(obj, v);
|
||
|
|
}
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyArray_CheckScalar(obj)) { /* 0-dim array or still array scalar */
|
||
|
|
PyObject *arr;
|
||
|
|
if (PyArray_Check(obj)) {
|
||
|
|
arr = PyArray_Cast((PyArrayObject *)obj, NPY_CDOUBLE);
|
||
|
|
}
|
||
|
|
else {
|
||
|
|
arr = PyArray_FromScalar(obj, PyArray_DescrFromType(NPY_CDOUBLE));
|
||
|
|
}
|
||
|
|
if (arr==NULL) return 0;
|
||
|
|
(*v).r = ((npy_cdouble *)PyArray_DATA(arr))->real;
|
||
|
|
(*v).i = ((npy_cdouble *)PyArray_DATA(arr))->imag;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
/* Python does not provide PyNumber_Complex function :-( */
|
||
|
|
(*v).i=0.0;
|
||
|
|
if (PyFloat_Check(obj)) {
|
||
|
|
#ifdef __sgi
|
||
|
|
(*v).r = PyFloat_AsDouble(obj);
|
||
|
|
#else
|
||
|
|
(*v).r = PyFloat_AS_DOUBLE(obj);
|
||
|
|
#endif
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyInt_Check(obj)) {
|
||
|
|
(*v).r = (double)PyInt_AS_LONG(obj);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
if (PyLong_Check(obj)) {
|
||
|
|
(*v).r = PyLong_AsDouble(obj);
|
||
|
|
return (!PyErr_Occurred());
|
||
|
|
}
|
||
|
|
if (PySequence_Check(obj) && !(PyString_Check(obj) || PyUnicode_Check(obj))) {
|
||
|
|
PyObject *tmp = PySequence_GetItem(obj,0);
|
||
|
|
if (tmp) {
|
||
|
|
if (complex_double_from_pyobj(v,tmp,errmess)) {
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
}
|
||
|
|
}
|
||
|
|
{
|
||
|
|
PyObject* err = PyErr_Occurred();
|
||
|
|
if (err==NULL)
|
||
|
|
err = PyExc_TypeError;
|
||
|
|
PyErr_SetString(err,errmess);
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['complex_float_from_pyobj'] = [
|
||
|
|
'complex_float', 'complex_double_from_pyobj']
|
||
|
|
cfuncs['complex_float_from_pyobj'] = """\
|
||
|
|
static int complex_float_from_pyobj(complex_float* v,PyObject *obj,const char *errmess) {
|
||
|
|
complex_double cd={0.0,0.0};
|
||
|
|
if (complex_double_from_pyobj(&cd,obj,errmess)) {
|
||
|
|
(*v).r = (float)cd.r;
|
||
|
|
(*v).i = (float)cd.i;
|
||
|
|
return 1;
|
||
|
|
}
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
needs['try_pyarr_from_char'] = ['pyobj_from_char1', 'TRYPYARRAYTEMPLATE']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_char'] = 'static int try_pyarr_from_char(PyObject* obj,char* v) {\n TRYPYARRAYTEMPLATE(char,\'c\');\n}\n'
|
||
|
|
needs['try_pyarr_from_signed_char'] = ['TRYPYARRAYTEMPLATE', 'unsigned_char']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_unsigned_char'] = 'static int try_pyarr_from_unsigned_char(PyObject* obj,unsigned_char* v) {\n TRYPYARRAYTEMPLATE(unsigned_char,\'b\');\n}\n'
|
||
|
|
needs['try_pyarr_from_signed_char'] = ['TRYPYARRAYTEMPLATE', 'signed_char']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_signed_char'] = 'static int try_pyarr_from_signed_char(PyObject* obj,signed_char* v) {\n TRYPYARRAYTEMPLATE(signed_char,\'1\');\n}\n'
|
||
|
|
needs['try_pyarr_from_short'] = ['pyobj_from_short1', 'TRYPYARRAYTEMPLATE']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_short'] = 'static int try_pyarr_from_short(PyObject* obj,short* v) {\n TRYPYARRAYTEMPLATE(short,\'s\');\n}\n'
|
||
|
|
needs['try_pyarr_from_int'] = ['pyobj_from_int1', 'TRYPYARRAYTEMPLATE']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_int'] = 'static int try_pyarr_from_int(PyObject* obj,int* v) {\n TRYPYARRAYTEMPLATE(int,\'i\');\n}\n'
|
||
|
|
needs['try_pyarr_from_long'] = ['pyobj_from_long1', 'TRYPYARRAYTEMPLATE']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_long'] = 'static int try_pyarr_from_long(PyObject* obj,long* v) {\n TRYPYARRAYTEMPLATE(long,\'l\');\n}\n'
|
||
|
|
needs['try_pyarr_from_long_long'] = [
|
||
|
|
'pyobj_from_long_long1', 'TRYPYARRAYTEMPLATE', 'long_long']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_long_long'] = 'static int try_pyarr_from_long_long(PyObject* obj,long_long* v) {\n TRYPYARRAYTEMPLATE(long_long,\'L\');\n}\n'
|
||
|
|
needs['try_pyarr_from_float'] = ['pyobj_from_float1', 'TRYPYARRAYTEMPLATE']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_float'] = 'static int try_pyarr_from_float(PyObject* obj,float* v) {\n TRYPYARRAYTEMPLATE(float,\'f\');\n}\n'
|
||
|
|
needs['try_pyarr_from_double'] = ['pyobj_from_double1', 'TRYPYARRAYTEMPLATE']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_double'] = 'static int try_pyarr_from_double(PyObject* obj,double* v) {\n TRYPYARRAYTEMPLATE(double,\'d\');\n}\n'
|
||
|
|
needs['try_pyarr_from_complex_float'] = [
|
||
|
|
'pyobj_from_complex_float1', 'TRYCOMPLEXPYARRAYTEMPLATE', 'complex_float']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_complex_float'] = 'static int try_pyarr_from_complex_float(PyObject* obj,complex_float* v) {\n TRYCOMPLEXPYARRAYTEMPLATE(float,\'F\');\n}\n'
|
||
|
|
needs['try_pyarr_from_complex_double'] = [
|
||
|
|
'pyobj_from_complex_double1', 'TRYCOMPLEXPYARRAYTEMPLATE', 'complex_double']
|
||
|
|
cfuncs[
|
||
|
|
'try_pyarr_from_complex_double'] = 'static int try_pyarr_from_complex_double(PyObject* obj,complex_double* v) {\n TRYCOMPLEXPYARRAYTEMPLATE(double,\'D\');\n}\n'
|
||
|
|
|
||
|
|
needs['create_cb_arglist'] = ['CFUNCSMESS', 'PRINTPYOBJERR', 'MINMAX']
|
||
|
|
|
||
|
|
# create the list of arguments to be used when calling back to python
|
||
|
|
cfuncs['create_cb_arglist'] = """\
|
||
|
|
static int create_cb_arglist(PyObject* fun,PyTupleObject* xa,const int maxnofargs,const int nofoptargs,int *nofargs,PyTupleObject **args,const char *errmess) {
|
||
|
|
PyObject *tmp = NULL;
|
||
|
|
PyObject *tmp_fun = NULL;
|
||
|
|
int tot,opt,ext,siz,i,di=0;
|
||
|
|
CFUNCSMESS(\"create_cb_arglist\\n\");
|
||
|
|
tot=opt=ext=siz=0;
|
||
|
|
/* Get the total number of arguments */
|
||
|
|
if (PyFunction_Check(fun)) {
|
||
|
|
tmp_fun = fun;
|
||
|
|
Py_INCREF(tmp_fun);
|
||
|
|
}
|
||
|
|
else {
|
||
|
|
di = 1;
|
||
|
|
if (PyObject_HasAttrString(fun,\"im_func\")) {
|
||
|
|
tmp_fun = PyObject_GetAttrString(fun,\"im_func\");
|
||
|
|
}
|
||
|
|
else if (PyObject_HasAttrString(fun,\"__call__\")) {
|
||
|
|
tmp = PyObject_GetAttrString(fun,\"__call__\");
|
||
|
|
if (PyObject_HasAttrString(tmp,\"im_func\"))
|
||
|
|
tmp_fun = PyObject_GetAttrString(tmp,\"im_func\");
|
||
|
|
else {
|
||
|
|
tmp_fun = fun; /* built-in function */
|
||
|
|
Py_INCREF(tmp_fun);
|
||
|
|
tot = maxnofargs;
|
||
|
|
if (PyCFunction_Check(fun)) {
|
||
|
|
/* In case the function has a co_argcount (like on PyPy) */
|
||
|
|
di = 0;
|
||
|
|
}
|
||
|
|
if (xa != NULL)
|
||
|
|
tot += PyTuple_Size((PyObject *)xa);
|
||
|
|
}
|
||
|
|
Py_XDECREF(tmp);
|
||
|
|
}
|
||
|
|
else if (PyFortran_Check(fun) || PyFortran_Check1(fun)) {
|
||
|
|
tot = maxnofargs;
|
||
|
|
if (xa != NULL)
|
||
|
|
tot += PyTuple_Size((PyObject *)xa);
|
||
|
|
tmp_fun = fun;
|
||
|
|
Py_INCREF(tmp_fun);
|
||
|
|
}
|
||
|
|
else if (F2PyCapsule_Check(fun)) {
|
||
|
|
tot = maxnofargs;
|
||
|
|
if (xa != NULL)
|
||
|
|
ext = PyTuple_Size((PyObject *)xa);
|
||
|
|
if(ext>0) {
|
||
|
|
fprintf(stderr,\"extra arguments tuple cannot be used with CObject call-back\\n\");
|
||
|
|
goto capi_fail;
|
||
|
|
}
|
||
|
|
tmp_fun = fun;
|
||
|
|
Py_INCREF(tmp_fun);
|
||
|
|
}
|
||
|
|
}
|
||
|
|
if (tmp_fun==NULL) {
|
||
|
|
fprintf(stderr,\"Call-back argument must be function|instance|instance.__call__|f2py-function but got %s.\\n\",(fun==NULL?\"NULL\":Py_TYPE(fun)->tp_name));
|
||
|
|
goto capi_fail;
|
||
|
|
}
|
||
|
|
if (PyObject_HasAttrString(tmp_fun,\"__code__\")) {
|
||
|
|
if (PyObject_HasAttrString(tmp = PyObject_GetAttrString(tmp_fun,\"__code__\"),\"co_argcount\")) {
|
||
|
|
PyObject *tmp_argcount = PyObject_GetAttrString(tmp,\"co_argcount\");
|
||
|
|
Py_DECREF(tmp);
|
||
|
|
if (tmp_argcount == NULL) {
|
||
|
|
goto capi_fail;
|
||
|
|
}
|
||
|
|
tot = PyInt_AsLong(tmp_argcount) - di;
|
||
|
|
Py_DECREF(tmp_argcount);
|
||
|
|
}
|
||
|
|
}
|
||
|
|
/* Get the number of optional arguments */
|
||
|
|
if (PyObject_HasAttrString(tmp_fun,\"__defaults__\")) {
|
||
|
|
if (PyTuple_Check(tmp = PyObject_GetAttrString(tmp_fun,\"__defaults__\")))
|
||
|
|
opt = PyTuple_Size(tmp);
|
||
|
|
Py_XDECREF(tmp);
|
||
|
|
}
|
||
|
|
/* Get the number of extra arguments */
|
||
|
|
if (xa != NULL)
|
||
|
|
ext = PyTuple_Size((PyObject *)xa);
|
||
|
|
/* Calculate the size of call-backs argument list */
|
||
|
|
siz = MIN(maxnofargs+ext,tot);
|
||
|
|
*nofargs = MAX(0,siz-ext);
|
||
|
|
#ifdef DEBUGCFUNCS
|
||
|
|
fprintf(stderr,\"debug-capi:create_cb_arglist:maxnofargs(-nofoptargs),tot,opt,ext,siz,nofargs=%d(-%d),%d,%d,%d,%d,%d\\n\",maxnofargs,nofoptargs,tot,opt,ext,siz,*nofargs);
|
||
|
|
#endif
|
||
|
|
if (siz<tot-opt) {
|
||
|
|
fprintf(stderr,\"create_cb_arglist: Failed to build argument list (siz) with enough arguments (tot-opt) required by user-supplied function (siz,tot,opt=%d,%d,%d).\\n\",siz,tot,opt);
|
||
|
|
goto capi_fail;
|
||
|
|
}
|
||
|
|
/* Initialize argument list */
|
||
|
|
*args = (PyTupleObject *)PyTuple_New(siz);
|
||
|
|
for (i=0;i<*nofargs;i++) {
|
||
|
|
Py_INCREF(Py_None);
|
||
|
|
PyTuple_SET_ITEM((PyObject *)(*args),i,Py_None);
|
||
|
|
}
|
||
|
|
if (xa != NULL)
|
||
|
|
for (i=(*nofargs);i<siz;i++) {
|
||
|
|
tmp = PyTuple_GetItem((PyObject *)xa,i-(*nofargs));
|
||
|
|
Py_INCREF(tmp);
|
||
|
|
PyTuple_SET_ITEM(*args,i,tmp);
|
||
|
|
}
|
||
|
|
CFUNCSMESS(\"create_cb_arglist-end\\n\");
|
||
|
|
Py_DECREF(tmp_fun);
|
||
|
|
return 1;
|
||
|
|
capi_fail:
|
||
|
|
if ((PyErr_Occurred())==NULL)
|
||
|
|
PyErr_SetString(#modulename#_error,errmess);
|
||
|
|
Py_XDECREF(tmp_fun);
|
||
|
|
return 0;
|
||
|
|
}
|
||
|
|
"""
|
||
|
|
|
||
|
|
|
||
|
|
def buildcfuncs():
|
||
|
|
from .capi_maps import c2capi_map
|
||
|
|
for k in c2capi_map.keys():
|
||
|
|
m = 'pyarr_from_p_%s1' % k
|
||
|
|
cppmacros[
|
||
|
|
m] = '#define %s(v) (PyArray_SimpleNewFromData(0,NULL,%s,(char *)v))' % (m, c2capi_map[k])
|
||
|
|
k = 'string'
|
||
|
|
m = 'pyarr_from_p_%s1' % k
|
||
|
|
# NPY_CHAR compatibility, NPY_STRING with itemsize 1
|
||
|
|
cppmacros[
|
||
|
|
m] = '#define %s(v,dims) (PyArray_New(&PyArray_Type, 1, dims, NPY_STRING, NULL, v, 1, NPY_ARRAY_CARRAY, NULL))' % (m)
|
||
|
|
|
||
|
|
|
||
|
|
############ Auxiliary functions for sorting needs ###################
|
||
|
|
|
||
|
|
def append_needs(need, flag=1):
|
||
|
|
# This function modifies the contents of the global `outneeds` dict.
|
||
|
|
if isinstance(need, list):
|
||
|
|
for n in need:
|
||
|
|
append_needs(n, flag)
|
||
|
|
elif isinstance(need, str):
|
||
|
|
if not need:
|
||
|
|
return
|
||
|
|
if need in includes0:
|
||
|
|
n = 'includes0'
|
||
|
|
elif need in includes:
|
||
|
|
n = 'includes'
|
||
|
|
elif need in typedefs:
|
||
|
|
n = 'typedefs'
|
||
|
|
elif need in typedefs_generated:
|
||
|
|
n = 'typedefs_generated'
|
||
|
|
elif need in cppmacros:
|
||
|
|
n = 'cppmacros'
|
||
|
|
elif need in cfuncs:
|
||
|
|
n = 'cfuncs'
|
||
|
|
elif need in callbacks:
|
||
|
|
n = 'callbacks'
|
||
|
|
elif need in f90modhooks:
|
||
|
|
n = 'f90modhooks'
|
||
|
|
elif need in commonhooks:
|
||
|
|
n = 'commonhooks'
|
||
|
|
else:
|
||
|
|
errmess('append_needs: unknown need %s\n' % (repr(need)))
|
||
|
|
return
|
||
|
|
if need in outneeds[n]:
|
||
|
|
return
|
||
|
|
if flag:
|
||
|
|
tmp = {}
|
||
|
|
if need in needs:
|
||
|
|
for nn in needs[need]:
|
||
|
|
t = append_needs(nn, 0)
|
||
|
|
if isinstance(t, dict):
|
||
|
|
for nnn in t.keys():
|
||
|
|
if nnn in tmp:
|
||
|
|
tmp[nnn] = tmp[nnn] + t[nnn]
|
||
|
|
else:
|
||
|
|
tmp[nnn] = t[nnn]
|
||
|
|
for nn in tmp.keys():
|
||
|
|
for nnn in tmp[nn]:
|
||
|
|
if nnn not in outneeds[nn]:
|
||
|
|
outneeds[nn] = [nnn] + outneeds[nn]
|
||
|
|
outneeds[n].append(need)
|
||
|
|
else:
|
||
|
|
tmp = {}
|
||
|
|
if need in needs:
|
||
|
|
for nn in needs[need]:
|
||
|
|
t = append_needs(nn, flag)
|
||
|
|
if isinstance(t, dict):
|
||
|
|
for nnn in t.keys():
|
||
|
|
if nnn in tmp:
|
||
|
|
tmp[nnn] = t[nnn] + tmp[nnn]
|
||
|
|
else:
|
||
|
|
tmp[nnn] = t[nnn]
|
||
|
|
if n not in tmp:
|
||
|
|
tmp[n] = []
|
||
|
|
tmp[n].append(need)
|
||
|
|
return tmp
|
||
|
|
else:
|
||
|
|
errmess('append_needs: expected list or string but got :%s\n' %
|
||
|
|
(repr(need)))
|
||
|
|
|
||
|
|
|
||
|
|
def get_needs():
|
||
|
|
# This function modifies the contents of the global `outneeds` dict.
|
||
|
|
res = {}
|
||
|
|
for n in outneeds.keys():
|
||
|
|
out = []
|
||
|
|
saveout = copy.copy(outneeds[n])
|
||
|
|
while len(outneeds[n]) > 0:
|
||
|
|
if outneeds[n][0] not in needs:
|
||
|
|
out.append(outneeds[n][0])
|
||
|
|
del outneeds[n][0]
|
||
|
|
else:
|
||
|
|
flag = 0
|
||
|
|
for k in outneeds[n][1:]:
|
||
|
|
if k in needs[outneeds[n][0]]:
|
||
|
|
flag = 1
|
||
|
|
break
|
||
|
|
if flag:
|
||
|
|
outneeds[n] = outneeds[n][1:] + [outneeds[n][0]]
|
||
|
|
else:
|
||
|
|
out.append(outneeds[n][0])
|
||
|
|
del outneeds[n][0]
|
||
|
|
if saveout and (0 not in map(lambda x, y: x == y, saveout, outneeds[n])) \
|
||
|
|
and outneeds[n] != []:
|
||
|
|
print(n, saveout)
|
||
|
|
errmess(
|
||
|
|
'get_needs: no progress in sorting needs, probably circular dependence, skipping.\n')
|
||
|
|
out = out + saveout
|
||
|
|
break
|
||
|
|
saveout = copy.copy(outneeds[n])
|
||
|
|
if out == []:
|
||
|
|
out = [n]
|
||
|
|
res[n] = out
|
||
|
|
return res
|