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Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍 https://github.com/madlabunimib/PyCTBN
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PyCTBN/venv/lib/python3.9/site-packages/scipy/_lib/doccer.py

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''' Utilities to allow inserting docstring fragments for common
parameters into function and method docstrings'''
import sys
__all__ = ['docformat', 'inherit_docstring_from', 'indentcount_lines',
'filldoc', 'unindent_dict', 'unindent_string', 'doc_replace']
def docformat(docstring, docdict=None):
''' Fill a function docstring from variables in dictionary
Adapt the indent of the inserted docs
Parameters
----------
docstring : string
docstring from function, possibly with dict formatting strings
docdict : dict, optional
dictionary with keys that match the dict formatting strings
and values that are docstring fragments to be inserted. The
indentation of the inserted docstrings is set to match the
minimum indentation of the ``docstring`` by adding this
indentation to all lines of the inserted string, except the
first.
Returns
-------
outstring : string
string with requested ``docdict`` strings inserted
Examples
--------
>>> docformat(' Test string with %(value)s', {'value':'inserted value'})
' Test string with inserted value'
>>> docstring = 'First line\\n Second line\\n %(value)s'
>>> inserted_string = "indented\\nstring"
>>> docdict = {'value': inserted_string}
>>> docformat(docstring, docdict)
'First line\\n Second line\\n indented\\n string'
'''
if not docstring:
return docstring
if docdict is None:
docdict = {}
if not docdict:
return docstring
lines = docstring.expandtabs().splitlines()
# Find the minimum indent of the main docstring, after first line
if len(lines) < 2:
icount = 0
else:
icount = indentcount_lines(lines[1:])
indent = ' ' * icount
# Insert this indent to dictionary docstrings
indented = {}
for name, dstr in docdict.items():
lines = dstr.expandtabs().splitlines()
try:
newlines = [lines[0]]
for line in lines[1:]:
newlines.append(indent+line)
indented[name] = '\n'.join(newlines)
except IndexError:
indented[name] = dstr
return docstring % indented
def inherit_docstring_from(cls):
"""
This decorator modifies the decorated function's docstring by
replacing occurrences of '%(super)s' with the docstring of the
method of the same name from the class `cls`.
If the decorated method has no docstring, it is simply given the
docstring of `cls`s method.
Parameters
----------
cls : Python class or instance
A class with a method with the same name as the decorated method.
The docstring of the method in this class replaces '%(super)s' in the
docstring of the decorated method.
Returns
-------
f : function
The decorator function that modifies the __doc__ attribute
of its argument.
Examples
--------
In the following, the docstring for Bar.func created using the
docstring of `Foo.func`.
>>> class Foo(object):
... def func(self):
... '''Do something useful.'''
... return
...
>>> class Bar(Foo):
... @inherit_docstring_from(Foo)
... def func(self):
... '''%(super)s
... Do it fast.
... '''
... return
...
>>> b = Bar()
>>> b.func.__doc__
'Do something useful.\n Do it fast.\n '
"""
def _doc(func):
cls_docstring = getattr(cls, func.__name__).__doc__
func_docstring = func.__doc__
if func_docstring is None:
func.__doc__ = cls_docstring
else:
new_docstring = func_docstring % dict(super=cls_docstring)
func.__doc__ = new_docstring
return func
return _doc
def extend_notes_in_docstring(cls, notes):
"""
This decorator replaces the decorated function's docstring
with the docstring from corresponding method in `cls`.
It extends the 'Notes' section of that docstring to include
the given `notes`.
"""
def _doc(func):
cls_docstring = getattr(cls, func.__name__).__doc__
# If python is called with -OO option,
# there is no docstring
if cls_docstring is None:
return func
end_of_notes = cls_docstring.find(' References\n')
if end_of_notes == -1:
end_of_notes = cls_docstring.find(' Examples\n')
if end_of_notes == -1:
end_of_notes = len(cls_docstring)
func.__doc__ = (cls_docstring[:end_of_notes] + notes +
cls_docstring[end_of_notes:])
return func
return _doc
def replace_notes_in_docstring(cls, notes):
"""
This decorator replaces the decorated function's docstring
with the docstring from corresponding method in `cls`.
It replaces the 'Notes' section of that docstring with
the given `notes`.
"""
def _doc(func):
cls_docstring = getattr(cls, func.__name__).__doc__
notes_header = ' Notes\n -----\n'
# If python is called with -OO option,
# there is no docstring
if cls_docstring is None:
return func
start_of_notes = cls_docstring.find(notes_header)
end_of_notes = cls_docstring.find(' References\n')
if end_of_notes == -1:
end_of_notes = cls_docstring.find(' Examples\n')
if end_of_notes == -1:
end_of_notes = len(cls_docstring)
func.__doc__ = (cls_docstring[:start_of_notes + len(notes_header)] +
notes +
cls_docstring[end_of_notes:])
return func
return _doc
def indentcount_lines(lines):
''' Minimum indent for all lines in line list
>>> lines = [' one', ' two', ' three']
>>> indentcount_lines(lines)
1
>>> lines = []
>>> indentcount_lines(lines)
0
>>> lines = [' one']
>>> indentcount_lines(lines)
1
>>> indentcount_lines([' '])
0
'''
indentno = sys.maxsize
for line in lines:
stripped = line.lstrip()
if stripped:
indentno = min(indentno, len(line) - len(stripped))
if indentno == sys.maxsize:
return 0
return indentno
def filldoc(docdict, unindent_params=True):
''' Return docstring decorator using docdict variable dictionary
Parameters
----------
docdict : dictionary
dictionary containing name, docstring fragment pairs
unindent_params : {False, True}, boolean, optional
If True, strip common indentation from all parameters in
docdict
Returns
-------
decfunc : function
decorator that applies dictionary to input function docstring
'''
if unindent_params:
docdict = unindent_dict(docdict)
def decorate(f):
f.__doc__ = docformat(f.__doc__, docdict)
return f
return decorate
def unindent_dict(docdict):
''' Unindent all strings in a docdict '''
can_dict = {}
for name, dstr in docdict.items():
can_dict[name] = unindent_string(dstr)
return can_dict
def unindent_string(docstring):
''' Set docstring to minimum indent for all lines, including first
>>> unindent_string(' two')
'two'
>>> unindent_string(' two\\n three')
'two\\n three'
'''
lines = docstring.expandtabs().splitlines()
icount = indentcount_lines(lines)
if icount == 0:
return docstring
return '\n'.join([line[icount:] for line in lines])
def doc_replace(obj, oldval, newval):
"""Decorator to take the docstring from obj, with oldval replaced by newval
Equivalent to ``func.__doc__ = obj.__doc__.replace(oldval, newval)``
Parameters
----------
obj: object
The object to take the docstring from.
oldval: string
The string to replace from the original docstring.
newval: string
The string to replace ``oldval`` with.
"""
# __doc__ may be None for optimized Python (-OO)
doc = (obj.__doc__ or '').replace(oldval, newval)
def inner(func):
func.__doc__ = doc
return func
return inner