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Old engine for Continuous Time Bayesian Networks. Superseded by reCTBN. 🐍 https://github.com/madlabunimib/PyCTBN
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PyCTBN/venv/lib/python3.9/site-packages/pandas/io/formats/html.py

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"""
Module for formatting output data in HTML.
"""
from textwrap import dedent
from typing import IO, Any, Dict, Iterable, List, Mapping, Optional, Tuple, Union, cast
from pandas._config import get_option
from pandas._libs import lib
from pandas import MultiIndex, option_context
from pandas.io.common import is_url
from pandas.io.formats.format import (
DataFrameFormatter,
TableFormatter,
buffer_put_lines,
get_level_lengths,
)
from pandas.io.formats.printing import pprint_thing
class HTMLFormatter(TableFormatter):
"""
Internal class for formatting output data in html.
This class is intended for shared functionality between
DataFrame.to_html() and DataFrame._repr_html_().
Any logic in common with other output formatting methods
should ideally be inherited from classes in format.py
and this class responsible for only producing html markup.
"""
indent_delta = 2
def __init__(
self,
formatter: DataFrameFormatter,
classes: Optional[Union[str, List[str], Tuple[str, ...]]] = None,
border: Optional[int] = None,
) -> None:
self.fmt = formatter
self.classes = classes
self.frame = self.fmt.frame
self.columns = self.fmt.tr_frame.columns
self.elements: List[str] = []
self.bold_rows = self.fmt.bold_rows
self.escape = self.fmt.escape
self.show_dimensions = self.fmt.show_dimensions
if border is None:
border = cast(int, get_option("display.html.border"))
self.border = border
self.table_id = self.fmt.table_id
self.render_links = self.fmt.render_links
self.col_space = {
column: f"{value}px" if isinstance(value, int) else value
for column, value in self.fmt.col_space.items()
}
@property
def show_row_idx_names(self) -> bool:
return self.fmt.show_row_idx_names
@property
def show_col_idx_names(self) -> bool:
return self.fmt.show_col_idx_names
@property
def row_levels(self) -> int:
if self.fmt.index:
# showing (row) index
return self.frame.index.nlevels
elif self.show_col_idx_names:
# see gh-22579
# Column misalignment also occurs for
# a standard index when the columns index is named.
# If the row index is not displayed a column of
# blank cells need to be included before the DataFrame values.
return 1
# not showing (row) index
return 0
def _get_columns_formatted_values(self) -> Iterable:
return self.columns
# https://github.com/python/mypy/issues/1237
@property
def is_truncated(self) -> bool: # type: ignore
return self.fmt.is_truncated
@property
def ncols(self) -> int:
return len(self.fmt.tr_frame.columns)
def write(self, s: Any, indent: int = 0) -> None:
rs = pprint_thing(s)
self.elements.append(" " * indent + rs)
def write_th(
self, s: Any, header: bool = False, indent: int = 0, tags: Optional[str] = None
) -> None:
"""
Method for writing a formatted <th> cell.
If col_space is set on the formatter then that is used for
the value of min-width.
Parameters
----------
s : object
The data to be written inside the cell.
header : bool, default False
Set to True if the <th> is for use inside <thead>. This will
cause min-width to be set if there is one.
indent : int, default 0
The indentation level of the cell.
tags : str, default None
Tags to include in the cell.
Returns
-------
A written <th> cell.
"""
col_space = self.col_space.get(s, None)
if header and col_space is not None:
tags = tags or ""
tags += f'style="min-width: {col_space};"'
self._write_cell(s, kind="th", indent=indent, tags=tags)
def write_td(self, s: Any, indent: int = 0, tags: Optional[str] = None) -> None:
self._write_cell(s, kind="td", indent=indent, tags=tags)
def _write_cell(
self, s: Any, kind: str = "td", indent: int = 0, tags: Optional[str] = None
) -> None:
if tags is not None:
start_tag = f"<{kind} {tags}>"
else:
start_tag = f"<{kind}>"
if self.escape:
# escape & first to prevent double escaping of &
esc = {"&": r"&amp;", "<": r"&lt;", ">": r"&gt;"}
else:
esc = {}
rs = pprint_thing(s, escape_chars=esc).strip()
if self.render_links and is_url(rs):
rs_unescaped = pprint_thing(s, escape_chars={}).strip()
start_tag += f'<a href="{rs_unescaped}" target="_blank">'
end_a = "</a>"
else:
end_a = ""
self.write(f"{start_tag}{rs}{end_a}</{kind}>", indent)
def write_tr(
self,
line: Iterable,
indent: int = 0,
indent_delta: int = 0,
header: bool = False,
align: Optional[str] = None,
tags: Optional[Dict[int, str]] = None,
nindex_levels: int = 0,
) -> None:
if tags is None:
tags = {}
if align is None:
self.write("<tr>", indent)
else:
self.write(f'<tr style="text-align: {align};">', indent)
indent += indent_delta
for i, s in enumerate(line):
val_tag = tags.get(i, None)
if header or (self.bold_rows and i < nindex_levels):
self.write_th(s, indent=indent, header=header, tags=val_tag)
else:
self.write_td(s, indent, tags=val_tag)
indent -= indent_delta
self.write("</tr>", indent)
def render(self) -> List[str]:
self._write_table()
if self.should_show_dimensions:
by = chr(215) # ×
self.write(
f"<p>{len(self.frame)} rows {by} {len(self.frame.columns)} columns</p>"
)
return self.elements
def write_result(self, buf: IO[str]) -> None:
buffer_put_lines(buf, self.render())
def _write_table(self, indent: int = 0) -> None:
_classes = ["dataframe"] # Default class.
use_mathjax = get_option("display.html.use_mathjax")
if not use_mathjax:
_classes.append("tex2jax_ignore")
if self.classes is not None:
if isinstance(self.classes, str):
self.classes = self.classes.split()
if not isinstance(self.classes, (list, tuple)):
raise TypeError(
"classes must be a string, list, "
f"or tuple, not {type(self.classes)}"
)
_classes.extend(self.classes)
if self.table_id is None:
id_section = ""
else:
id_section = f' id="{self.table_id}"'
self.write(
f'<table border="{self.border}" class="{" ".join(_classes)}"{id_section}>',
indent,
)
if self.fmt.header or self.show_row_idx_names:
self._write_header(indent + self.indent_delta)
self._write_body(indent + self.indent_delta)
self.write("</table>", indent)
def _write_col_header(self, indent: int) -> None:
truncate_h = self.fmt.truncate_h
if isinstance(self.columns, MultiIndex):
template = 'colspan="{span:d}" halign="left"'
if self.fmt.sparsify:
# GH3547
sentinel = lib.no_default
else:
sentinel = False
levels = self.columns.format(sparsify=sentinel, adjoin=False, names=False)
level_lengths = get_level_lengths(levels, sentinel)
inner_lvl = len(level_lengths) - 1
for lnum, (records, values) in enumerate(zip(level_lengths, levels)):
if truncate_h:
# modify the header lines
ins_col = self.fmt.tr_col_num
if self.fmt.sparsify:
recs_new = {}
# Increment tags after ... col.
for tag, span in list(records.items()):
if tag >= ins_col:
recs_new[tag + 1] = span
elif tag + span > ins_col:
recs_new[tag] = span + 1
if lnum == inner_lvl:
values = (
values[:ins_col] + ("...",) + values[ins_col:]
)
else:
# sparse col headers do not receive a ...
values = (
values[:ins_col]
+ (values[ins_col - 1],)
+ values[ins_col:]
)
else:
recs_new[tag] = span
# if ins_col lies between tags, all col headers
# get ...
if tag + span == ins_col:
recs_new[ins_col] = 1
values = values[:ins_col] + ("...",) + values[ins_col:]
records = recs_new
inner_lvl = len(level_lengths) - 1
if lnum == inner_lvl:
records[ins_col] = 1
else:
recs_new = {}
for tag, span in list(records.items()):
if tag >= ins_col:
recs_new[tag + 1] = span
else:
recs_new[tag] = span
recs_new[ins_col] = 1
records = recs_new
values = values[:ins_col] + ["..."] + values[ins_col:]
# see gh-22579
# Column Offset Bug with to_html(index=False) with
# MultiIndex Columns and Index.
# Initially fill row with blank cells before column names.
# TODO: Refactor to remove code duplication with code
# block below for standard columns index.
row = [""] * (self.row_levels - 1)
if self.fmt.index or self.show_col_idx_names:
# see gh-22747
# If to_html(index_names=False) do not show columns
# index names.
# TODO: Refactor to use _get_column_name_list from
# DataFrameFormatter class and create a
# _get_formatted_column_labels function for code
# parity with DataFrameFormatter class.
if self.fmt.show_index_names:
name = self.columns.names[lnum]
row.append(pprint_thing(name or ""))
else:
row.append("")
tags = {}
j = len(row)
for i, v in enumerate(values):
if i in records:
if records[i] > 1:
tags[j] = template.format(span=records[i])
else:
continue
j += 1
row.append(v)
self.write_tr(row, indent, self.indent_delta, tags=tags, header=True)
else:
# see gh-22579
# Column misalignment also occurs for
# a standard index when the columns index is named.
# Initially fill row with blank cells before column names.
# TODO: Refactor to remove code duplication with code block
# above for columns MultiIndex.
row = [""] * (self.row_levels - 1)
if self.fmt.index or self.show_col_idx_names:
# see gh-22747
# If to_html(index_names=False) do not show columns
# index names.
# TODO: Refactor to use _get_column_name_list from
# DataFrameFormatter class.
if self.fmt.show_index_names:
row.append(self.columns.name or "")
else:
row.append("")
row.extend(self._get_columns_formatted_values())
align = self.fmt.justify
if truncate_h:
ins_col = self.row_levels + self.fmt.tr_col_num
row.insert(ins_col, "...")
self.write_tr(row, indent, self.indent_delta, header=True, align=align)
def _write_row_header(self, indent: int) -> None:
truncate_h = self.fmt.truncate_h
row = [x if x is not None else "" for x in self.frame.index.names] + [""] * (
self.ncols + (1 if truncate_h else 0)
)
self.write_tr(row, indent, self.indent_delta, header=True)
def _write_header(self, indent: int) -> None:
self.write("<thead>", indent)
if self.fmt.header:
self._write_col_header(indent + self.indent_delta)
if self.show_row_idx_names:
self._write_row_header(indent + self.indent_delta)
self.write("</thead>", indent)
def _get_formatted_values(self) -> Dict[int, List[str]]:
with option_context("display.max_colwidth", None):
fmt_values = {i: self.fmt._format_col(i) for i in range(self.ncols)}
return fmt_values
def _write_body(self, indent: int) -> None:
self.write("<tbody>", indent)
fmt_values = self._get_formatted_values()
# write values
if self.fmt.index and isinstance(self.frame.index, MultiIndex):
self._write_hierarchical_rows(fmt_values, indent + self.indent_delta)
else:
self._write_regular_rows(fmt_values, indent + self.indent_delta)
self.write("</tbody>", indent)
def _write_regular_rows(
self, fmt_values: Mapping[int, List[str]], indent: int
) -> None:
truncate_h = self.fmt.truncate_h
truncate_v = self.fmt.truncate_v
nrows = len(self.fmt.tr_frame)
if self.fmt.index:
fmt = self.fmt._get_formatter("__index__")
if fmt is not None:
index_values = self.fmt.tr_frame.index.map(fmt)
else:
index_values = self.fmt.tr_frame.index.format()
row: List[str] = []
for i in range(nrows):
if truncate_v and i == (self.fmt.tr_row_num):
str_sep_row = ["..."] * len(row)
self.write_tr(
str_sep_row,
indent,
self.indent_delta,
tags=None,
nindex_levels=self.row_levels,
)
row = []
if self.fmt.index:
row.append(index_values[i])
# see gh-22579
# Column misalignment also occurs for
# a standard index when the columns index is named.
# Add blank cell before data cells.
elif self.show_col_idx_names:
row.append("")
row.extend(fmt_values[j][i] for j in range(self.ncols))
if truncate_h:
dot_col_ix = self.fmt.tr_col_num + self.row_levels
row.insert(dot_col_ix, "...")
self.write_tr(
row, indent, self.indent_delta, tags=None, nindex_levels=self.row_levels
)
def _write_hierarchical_rows(
self, fmt_values: Mapping[int, List[str]], indent: int
) -> None:
template = 'rowspan="{span}" valign="top"'
truncate_h = self.fmt.truncate_h
truncate_v = self.fmt.truncate_v
frame = self.fmt.tr_frame
nrows = len(frame)
assert isinstance(frame.index, MultiIndex)
idx_values = frame.index.format(sparsify=False, adjoin=False, names=False)
idx_values = list(zip(*idx_values))
if self.fmt.sparsify:
# GH3547
sentinel = lib.no_default
levels = frame.index.format(sparsify=sentinel, adjoin=False, names=False)
level_lengths = get_level_lengths(levels, sentinel)
inner_lvl = len(level_lengths) - 1
if truncate_v:
# Insert ... row and adjust idx_values and
# level_lengths to take this into account.
ins_row = self.fmt.tr_row_num
# cast here since if truncate_v is True, self.fmt.tr_row_num is not None
ins_row = cast(int, ins_row)
inserted = False
for lnum, records in enumerate(level_lengths):
rec_new = {}
for tag, span in list(records.items()):
if tag >= ins_row:
rec_new[tag + 1] = span
elif tag + span > ins_row:
rec_new[tag] = span + 1
# GH 14882 - Make sure insertion done once
if not inserted:
dot_row = list(idx_values[ins_row - 1])
dot_row[-1] = "..."
idx_values.insert(ins_row, tuple(dot_row))
inserted = True
else:
dot_row = list(idx_values[ins_row])
dot_row[inner_lvl - lnum] = "..."
idx_values[ins_row] = tuple(dot_row)
else:
rec_new[tag] = span
# If ins_row lies between tags, all cols idx cols
# receive ...
if tag + span == ins_row:
rec_new[ins_row] = 1
if lnum == 0:
idx_values.insert(
ins_row, tuple(["..."] * len(level_lengths))
)
# GH 14882 - Place ... in correct level
elif inserted:
dot_row = list(idx_values[ins_row])
dot_row[inner_lvl - lnum] = "..."
idx_values[ins_row] = tuple(dot_row)
level_lengths[lnum] = rec_new
level_lengths[inner_lvl][ins_row] = 1
for ix_col in range(len(fmt_values)):
fmt_values[ix_col].insert(ins_row, "...")
nrows += 1
for i in range(nrows):
row = []
tags = {}
sparse_offset = 0
j = 0
for records, v in zip(level_lengths, idx_values[i]):
if i in records:
if records[i] > 1:
tags[j] = template.format(span=records[i])
else:
sparse_offset += 1
continue
j += 1
row.append(v)
row.extend(fmt_values[j][i] for j in range(self.ncols))
if truncate_h:
row.insert(
self.row_levels - sparse_offset + self.fmt.tr_col_num, "..."
)
self.write_tr(
row,
indent,
self.indent_delta,
tags=tags,
nindex_levels=len(levels) - sparse_offset,
)
else:
row = []
for i in range(len(frame)):
if truncate_v and i == (self.fmt.tr_row_num):
str_sep_row = ["..."] * len(row)
self.write_tr(
str_sep_row,
indent,
self.indent_delta,
tags=None,
nindex_levels=self.row_levels,
)
idx_values = list(
zip(*frame.index.format(sparsify=False, adjoin=False, names=False))
)
row = []
row.extend(idx_values[i])
row.extend(fmt_values[j][i] for j in range(self.ncols))
if truncate_h:
row.insert(self.row_levels + self.fmt.tr_col_num, "...")
self.write_tr(
row,
indent,
self.indent_delta,
tags=None,
nindex_levels=frame.index.nlevels,
)
class NotebookFormatter(HTMLFormatter):
"""
Internal class for formatting output data in html for display in Jupyter
Notebooks. This class is intended for functionality specific to
DataFrame._repr_html_() and DataFrame.to_html(notebook=True)
"""
def _get_formatted_values(self) -> Dict[int, List[str]]:
return {i: self.fmt._format_col(i) for i in range(self.ncols)}
def _get_columns_formatted_values(self) -> List[str]:
return self.columns.format()
def write_style(self) -> None:
# We use the "scoped" attribute here so that the desired
# style properties for the data frame are not then applied
# throughout the entire notebook.
template_first = """\
<style scoped>"""
template_last = """\
</style>"""
template_select = """\
.dataframe %s {
%s: %s;
}"""
element_props = [
("tbody tr th:only-of-type", "vertical-align", "middle"),
("tbody tr th", "vertical-align", "top"),
]
if isinstance(self.columns, MultiIndex):
element_props.append(("thead tr th", "text-align", "left"))
if self.show_row_idx_names:
element_props.append(
("thead tr:last-of-type th", "text-align", "right")
)
else:
element_props.append(("thead th", "text-align", "right"))
template_mid = "\n\n".join(map(lambda t: template_select % t, element_props))
template = dedent("\n".join((template_first, template_mid, template_last)))
self.write(template)
def render(self) -> List[str]:
self.write("<div>")
self.write_style()
super().render()
self.write("</div>")
return self.elements